Candidatus Caldarchaeum subterraneum: CSUB_C0553
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Entry
CSUB_C0553 CDS
T02904
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
csu
Candidatus Caldarchaeum subterraneum
Pathway
csu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
csu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CSUB_C0553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarboxypepD_reg
Big_1
Ig_DR_A0283-like
DUF7382
SdrD_B
bMG3
SpaA
Motif
Other DBs
NCBI-ProteinID:
BAJ50413
UniProt:
E6N5P7
LinkDB
All DBs
Position
complement(520156..527916)
Genome browser
AA seq
2586 aa
AA seq
DB search
MLALLLALPTAFLGAAIVTPAFAQPNYTAWLKIVTASWDGAPYVAGAPPVQPTGVGFADR
YNVTNVCVELYKFKNPSGASTAPLDSWEGPIRAGSPNGTGFIRVSWPAGWENVTIIVKAK
SYQGECIGEGNPFRGIIVYWLTVNPTPSFLSKFGFSAFNSTINDDGIEDTHGGPFNWNIF
PPLGSGPVDNVNYASGPITFQINHNDPQRAWLARAAYIFKLFHEHTWYATNDVLTYATIF
IYDTDHTDASSTQSLIQAAITGDDGQSRYTREIYPRSAGVGSGKFAQNRLVPIPLQSINL
GTREPFEGGIPDPEDNNGFIEAPHLNATKRVWWETVLVNQTFYVGNEYNQTGGPNAPEYA
TDPATGKIRPLFGAYPSNPSVNPTITQGGITGVPAGPFSLVLNETVYIDPPRPLLPTWEG
TDTTANVETVGPSIANFENNTVFYARFCVQDADLAIQHPWIGDKMVGAEVTLNFKTSADV
PYYLAHSIHTTGSDGCTNDPHKWPGYLGQYSKFARFPNGTNWGLRGSLNASYFFNPADDV
SPAWRPGGYFEQAWGGSWQGPWINAGMNWSALIPEITYMKTRQLSDDPRWGGFEIQVKWK
GGARNGYGGSAVLVDSVRVRNPYAIAATNTTTYNGWIVPNVVLGNNTVLIKIHNEVTVTL
SRGPLGTPRPIRGPVTLMISSNTPIGMRLQNYNPLTGTFDIFVNYPPGVDLRVDIVENAT
HGGFIRTPFTFSGVIASIKYHDAATNQPIVGNISYALAGWQDIGPDGVIDSTSIRRFNVT
TTGETGAAEVEIWPGPPGSQTIRTLVSSNNTDIQTLDPAFTYNDFVGGMLFSGQPQSGTF
AILNATKRQVVILQSLAPHKAPDIALARAGLVYITANVHDLAYRLVDNLGNPAPAANTAI
TLQRGNGPPITKTGASLIPDFFPSTGSLQWSYDQHGEGWAVFYQLPEDLAYMVTVTFDGT
PVGEATVDKLTHTIMEDLVLRIYKVKLVFVDCENSPLSREAFVKVVPPSPATPYVTQLDS
TGALDFGYLAGGQYTIDGVWWKGVWVKFTDARIGDDTLPLNPDGSLTFTVDSNIDSPIKL
TALINDFIFTTWDYNQDNRIPRLNITLTWVGVHPLTGSRLYFLETMDPTGDTNTDKFNTT
LAFSQFFRYRIDHFFGGISRSNGLKTYGDVRYVFYKMPSALYNITVTTVTTGDPETQQTP
GNSKWPGRTVPVDYEIKIDWTSHSSPPSIRKTPAGQVNDRVVLRVYMTWNGEFVTDPNLN
PIGNATLYKTCGPVRIDLLTWAHTFKQRIVDGDFDYLNEARRIGNATYHIVNDNGVNMEM
FIPEDGVFSSLFVSKWTEDTLLTTWLKADSQHSSNIWWNGTYRKQDLTFYSYVYPLEFTR
GEQPWARFYDKAGLTGSGWLTTQKGPLTSPGGDVRPGDSFLIREFFNPAVNETANGKWPT
HNFTVVGNEGLWNQQRWRWEQAVAAGAVEEISTPFKGKRYIEVPTRPTTLVFEKEVVTVP
IPVGFITLNLKDEDLARPIPYAVVQLDVYYDDSGTVDRSSSVLYKTGRDGNLTLLYPTQE
AMENILGTNVVNYTLTVYWYLNSSIVYKDAFNLTKRGYSVDKVAIADVTFVLAISANKDR
PVKDLYARIWWLNVTDGNTVFPGRITVDHARRTWTYTAVPETRGAAKWTTGQLTLPWLPT
SERFTKSDWDLVFDSSAGRWVYDDVTRSWDIPYPSYEDGRMIDGWPYNPVPTGYDRRHPH
LTNQENSRIQYRISVWSDQLPIDPSSPKYNNGAWQRDHYELVWRIPAQFPDAWMLFGHPP
FDITFYRGTTGTGQFQPIPGYALTRTWTATPTPGSKVVAIKLNATDVDIPVFWQVGDYEL
GSYDCGPLLGYIVKGRIVPPLGATFAPKPIDAVTTAGTITVGDKTVNICISGKPVGLVTV
TSGDTPSTVIWGGSTLVIDEVSPPPSIWYNDGTGQAGADNPNRGTTSNYWRNWVSQAIDP
LTGQPVNLHVGDQLQVPGVDLGIQYMGYGRPYEGVARTATVTVVSNDPDNRAHRPFIKMF
EFQNVSARITDFNGRPLPGAFYQIIDAQTGKSAAWSYAGPDGRIVPMPIRKPGGVFIQRV
LYLGQGANGEPTWPVNSFARWPIAYDSRDDETTQETQKPDIPLGFAYTAEAGPWPTGDGW
FRADVCRHAGDGSYNYTAGVLEALASCPPAGWGRSFDVITRIFDLRIRFVYGDAQRPADP
AYVFSAPSLALPDDFIIRGQGAIFEAKRLARSSYDIVALWPDANGEEVGRRTFDVSRTNV
GTVEGTVVLALRDLSFNVVDRQGRPVAGARVSVSPNLVREQDIQLRPDSIFTILRVPDGR
TYDFTVEWTSPYGTTARAAVRDTPAGLQSRGSIVIPVDDVTLTVVDFDGRPVAGAAIRFG
GQQVGSTDSQGVVIIGQVPLDNEYQIEVSKDGTTIGGDRVRFTASRTSATIQAGIYDIAV
IVKGAAGQPIQGAIVELVRGGTTIATAATDASGSAVFSKVVGADYSVRASYEQFSNSANV
ARGVRSATIVLDLYTILFGVPMTLATFLALIIGLILLVIVVVVIVSEYIRWRGRRLGIYP
AAPPKK
NT seq
7761 nt
NT seq
+upstream
nt +downstream
nt
ttgctagctttgctgctagcgcttccgacggctttccttggagcagcgattgtcacgccg
gcgtttgcgcagccgaactacaccgcatggctcaaaatagtgacggcttcgtgggatggt
gcaccttatgtagctggtgctcctcctgtgcagccgactggtgttggctttgctgatagg
tataatgtgacgaatgtctgtgttgagctgtataagttcaagaacccaagtggagcaagt
actgcgcctttggatagttgggagggtccgattagagcgggcagtcctaacggcactggt
ttcatcagggtttcgtggcctgctggctgggagaacgttaccattattgtgaaggcgaag
agctatcagggtgagtgtatcggcgagggcaacccattccgaggaatcatagtctactgg
ctaacagtcaaccccacaccgagcttcctaagcaagttcgggttctcagctttcaacagc
actataaacgatgacggcatagaagatacccacggtggtccatttaactggaacatcttt
ccgcctctcgggtcagggcccgtggacaacgtaaactatgcatccggtccaataactttc
cagattaaccacaacgatcctcagagggcttggttggctcgcgcggcctacatcttcaag
ctcttccacgaacacacatggtacgccaccaatgatgtgttgacttatgcgacgatattc
atatacgacaccgaccacacagacgccagctccacacaatcactgatacaggcggctata
accggagatgatggccagagcagatacactcgtgaaatctatccacgctccgctggtgtg
ggttcaggcaagtttgcacagaaccgcctcgtcccaataccgctgcagagcatcaacctc
ggcaccagagaaccattcgaaggaggtattcctgaccctgaagataacaacggttttatc
gaggctccgcatctcaacgccaccaagcgtgtctggtgggagaccgtactcgtcaaccag
accttctacgtaggaaacgaatacaaccaaacaggtggtccaaatgctcccgagtatgct
accgaccctgccaccggcaagataaggcctctgttcggagcctatccatcaaacccatcg
gtcaacccaacgattacgcagggaggcatcacaggtgttcccgctgggccgttcagcctc
gtacttaacgagacagtgtatatagacccacctaggcccttgctgccaacatgggagggc
actgacactactgcgaatgttgagaccgttgggccatcgatagcgaactttgagaataac
acggtgttttatgctcggttctgtgtgcaggacgctgaccttgccatccagcatccatgg
ataggcgataagatggtcggggcagaggtcaccctcaacttcaagacatcagctgatgta
ccctactacctggcccacagcatacacaccacgggcagcgacggctgcaccaacgacccg
cacaagtggcctggatacctaggccagtacagcaaattcgcccgtttccccaacggaacc
aactggggcctcagaggaagcctcaacgccagctacttcttcaacccagcagacgacgtc
tctccagcatggagaccaggcggatactttgagcaggcgtggggcggaagctggcaggga
ccatggataaacgcgggcatgaactggagcgccctcattcccgaaatcacctacatgaag
acaagacagctcagcgatgacccgcggtggggcggcttcgagatacaggtcaagtggaaa
ggcggagcaagaaacggatacggcggctccgcagtcctcgtcgacagcgtaagagtacgc
aacccctacgccatagcagccaccaacacaaccacatacaacggatggatagtcccgaac
gtagttctaggaaacaacacagtcctcatcaagatacacaacgaggtcaccgtaaccctc
agccgaggacccctcggaacaccgaggccaatccgtggaccggttacactgatgatctcc
tcaaacacccccataggaatgcggttgcagaactacaacccgctaacaggcaccttcgac
atattcgtcaactatccgcctggagtagacctacgagtagacatagttgaaaacgcaaca
catggcggcttcataagaacgcccttcaccttcagcggcgttatagctagcatcaaatac
catgacgcagccaccaaccagccgatagtcggaaacatttcctacgctctcgcaggttgg
caggacatcggaccagacggggtaatagacagcacatccatcagaaggttcaacgtaact
actaccggcgagaccggtgcagccgaggtcgagatatggccagggccaccgggttcacag
acaatcaggacacttgtatcatcaaacaacacagacatacagacattggatccagcgttc
acctacaatgatttcgtcggaggaatgctcttctcaggccagcctcagtcaggtacattc
gcgatactcaacgccacaaagagacaggtagtaatactgcagagtcttgcgccgcacaag
gctcctgacatagcgttggcaagagcgggtctcgtctacattacggctaatgttcacgat
cttgcctataggcttgttgacaacctcggcaacccggctccagccgccaacacagccatc
accctacagcgcggcaacggaccaccaataaccaagacaggagccagcctgatacccgac
ttcttcccatccacaggcagcctacagtggagctatgaccagcacggcgaaggatgggca
gtattctaccagctgcccgaagacctcgcatacatggtcaccgtcaccttcgacggcaca
cccgtcggagaagccaccgtcgacaaactaacccacaccatcatggaggacctcgtcctc
cgcatctacaaagtcaagctcgtcttcgtcgactgcgaaaacagcccactctccagagaa
gcattcgtcaaagtagtgccaccatcacccgcaacaccctacgtaacacagctcgacagc
acaggcgccctcgacttcggctacctagcaggaggacaatacacaatcgacggcgtatgg
tggaagggtgtatgggtcaagttcacagacgctagaataggcgacgacacactgccgctc
aaccccgacggaagcctaacattcaccgtcgacagcaacatcgactcacccatcaaactc
acagccctcatcaacgacttcatattcacaacatgggactacaaccaagacaacaggata
cccaggctcaacatcaccctcacatgggtcggtgtacacccgctaacaggcagccgccta
tacttcctcgaaaccatggacccaacaggcgacaccaacactgacaaattcaacacaacc
ctcgcattcagccagttcttccgctacagaatcgaccacttcttcggcggcatatccagg
tcaaacggcctcaagacctacggagacgtccgctacgtcttctacaagatgcccagcgca
ctctacaacataacagtaacaacagtaacaacaggagaccccgagacgcaacagacacca
ggcaacagcaagtggccaggcagaaccgtgcccgtcgactatgagatcaagattgactgg
acaagccacagcagcccaccgagcatcagaaagactcctgcaggccaggtcaatgacaga
gtcgtcctcagagtctacatgacatggaacggtgaattcgtcaccgaccccaacctcaac
ccaatcggcaacgcaacactctacaagacatgcggacccgtcaggatagacctgctgaca
tgggcccacaccttcaaacagcgcatcgtcgacggcgacttcgactacctcaacgaagca
cgccgcataggcaacgccacctaccacatagtcaacgacaacggcgtcaacatggagatg
ttcatacccgaagacggagtcttctcatcgctcttcgtcagcaaatggaccgaagacacc
ctcctaaccacttggctcaaagcagacagccagcacagcagcaacatctggtggaacggc
acctaccgcaaacaagacctcaccttctacagctacgtctacccgctcgagttcaccaga
ggcgaacagccatgggcaagattctacgacaaagcagggctaacaggcagcggatggctg
acaacgcagaagggaccgctaaccagcccaggaggagacgttaggccaggagacagcttc
ctcataagagagttcttcaacccagcggtcaacgaaacagccaatggcaagtggcccacc
cacaacttcacagtcgtaggcaatgaaggcctctggaaccagcagagatggagatgggag
caagcggtcgcagccggagcagtcgaagagatatcaacaccattcaaaggaaagaggtac
atcgaggttccgacaagacccacaacactggtgttcgagaaagaagtcgtaacagtaccc
ataccggtaggcttcataaccctcaacctcaaagacgaagacctcgcaagacccatacca
tacgcagtcgtacagctcgacgtatactacgacgatagcggtacagtggatcgctcctcc
tcagttctctacaagacaggacgtgacggcaacctcacactcctctacccgacacaggaa
gccatggagaacatcctcgggacaaacgttgttaactacacgttgactgtttactggtac
ctcaacagcagcatcgtctacaaagacgccttcaacctcaccaagagaggctactcggtt
gacaaagtagccatcgccgatgtgacattcgtcctcgccataagcgccaacaaagaccga
cccgtcaaagacctctacgcaagaatctggtggctcaacgtaacagacggcaatacagtc
ttcccaggcaggataacagtcgaccacgcccgcagaacatggacatacacagccgtaccc
gagacacgtggagcagccaagtggacaacaggccagctcacactcccatggctaccgaca
tcagagcgcttcaccaagagcgactgggacctggtattcgactcttcagccggcagatgg
gtctacgacgatgtaacacgctcatgggacataccctacccaagctatgaagacggcaga
atgattgacggatggccatacaacccagtcccgaccggctacgatcgacgccacccgcat
ctcaccaaccaggaaaacagcagaatacagtaccgcatcagcgtatggagcgaccagcta
cccatcgacccatcatcgccaaaatataacaacggagcatggcagcgcgaccactatgaa
ctggtctggagaatacccgcccaattcccagacgcgtggatgctgttcggacacccgccc
ttcgacatcacattctacagaggaacaacaggaacaggacagttccagccgatacctggc
tacgcgttgacacggacatggacagccacaccaacaccaggcagcaaagtcgtcgccatc
aagctcaacgccacagacgtcgacatccccgtcttctggcaggtaggcgactacgagctc
ggcagctacgattgcgggccgctcctaggatacatcgtcaaaggtagaatagtgccacct
cttggcgcaacattcgcaccgaaacccatcgacgccgtaacaacagcgggaaccatcaca
gtcggcgacaagacagtcaacatatgcatctccggcaaaccagttggactcgtaacggtc
accagcggagacacaccctcgacagtcatatggggcggcagcaccctcgtcatagacgag
gtctcaccgccaccaagcatatggtacaacgacggcacaggacaagcaggcgcagacaac
cccaacagaggaacaaccagcaactactggagaaactgggtcagccaagccatcgaccca
ctcacaggacagcccgtaaacctacacgtcggcgaccagctacaggtgcctggcgtagac
ctaggcatacagtacatgggctacggcagaccatatgaaggcgtcgcacgcaccgcaacg
gtcacggtagtgagcaacgacccagacaacagagcacacagacccttcatcaagatgttc
gagttccagaacgtctcggccagaatcaccgacttcaacgggaggccactgcccggagcc
ttctaccagataatcgacgcacagacaggcaaatcagccgcatggagctatgcaggaccc
gacggcagaatagtgcccatgcccattagaaagcccggaggagtcttcatccagagagtc
ctctacctcggacagggcgccaacggagaacccacatggccagtcaacagcttcgccaga
tggcccatagcatatgacagcagagacgacgaaaccacacaggaaacacagaaaccagac
atacctctcggcttcgcatacacagccgaagcaggaccctggccaacgggagacggatgg
ttccgagccgatgtctgtagacatgcaggagatggctcatacaactacaccgcaggagtc
ctagaggcactcgccagctgcccgccggcaggctggggcagaagcttcgacgtcatcaca
cgcatcttcgacctcaggataagattcgtctacggcgacgcacagagaccagccgaccca
gcatacgtcttcagcgcacccagcctagcactgcccgacgacttcatcatacgtggacaa
ggagccatcttcgaagccaaacgcctcgccagaagctcctacgacatcgtcgccctctgg
cccgacgcaaacggtgaagaagtcggcagaagaaccttcgacgtcagcagaaccaacgtc
ggaaccgttgagggcacagtcgtcctcgcactcagagacctcagcttcaacgtcgtcgac
agacagggcagacccgtggcaggcgctagagtaagcgtctcacccaacctagtcagagaa
caggacatacagctaagacccgacagcatattcacaatcctccgcgtacccgacggcaga
acctatgacttcaccgtcgaatggaccagcccatacggaacaacagcgagagcagcggta
agagacacgccggcaggcctacagagcagaggcagcatagtcatacccgtagacgacgta
accctgacagtagtcgacttcgacggtagacccgtggcaggcgcagccataaggttcggc
ggacaacaagtaggctcaacagacagccaaggcgtcgtcatcatcggacaagtaccgctc
gacaacgaataccagatagaggtttccaaggatggcacaactatcggcggagaccgtgta
aggttcaccgcctcccggacatcggcaaccatacaggcaggcatatacgacatcgccgta
attgtcaagggcgctgcaggacagccgatacagggcgccattgttgagctggtgagagga
ggaacaacaatagccacagcggccacagacgccagcggttcggcggtcttctccaaagtc
gtgggcgcagactactcagtaagagcatcctacgaacagttcagcaactcagccaacgta
gctagaggcgttagaagcgcaacaatcgtcctcgacctctacaccatactgttcggcgta
cccatgaccctcgccacgttcctcgcgctgatcatcggcctcatactgctggtcatcgtc
gtagtcgtcatcgtcagcgaatacatccgctggagaggacgccgcctcggcatctaccca
gcagcaccaccaaagaaataa
DBGET
integrated database retrieval system
