Candidatus Caldarchaeum subterraneum: CSUB_C0783
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Entry
CSUB_C0783 CDS
T02904
Name
(GenBank) ribosome biogenesis protein
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
csu
Candidatus Caldarchaeum subterraneum
Pathway
csu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CSUB_C0783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csu03009
]
CSUB_C0783
Enzymes [BR:
csu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
CSUB_C0783
Ribosome biogenesis [BR:
csu03009
]
Eukaryotic type
90S particles
Other 90S particles
CSUB_C0783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Mustang
Motif
Other DBs
NCBI-ProteinID:
BAJ50641
UniProt:
E6N653
LinkDB
All DBs
Position
complement(758449..759114)
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AA seq
221 aa
AA seq
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MAEAALETVPPEIQGHPAVVKDAERRGKKPSQILLDRSYHHFAMKKLPDAEKRGRPDIVH
FCLLEALGSPLNQANKLETYVATRGGLVIYVNPRVRLPRVYERFKGVVEKLFAEGEIRSE
TGETLLRCEKKSLKTLAESLNPSTKILLTERGEPVNARGFSAALAGHTRPLIMVGCFPHG
DFTSETKSLADKTLAIHQTPLEAWTVISRVLCYIEQNLIPL
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
ttggcggaggctgcgctcgagactgttccaccagagatacagggtcatcccgctgttgtg
aaggatgctgagcggcgtgggaaaaagccgagccagatactgcttgacaggtcctatcac
cacttcgccatgaaaaagcttcccgacgccgagaaacgcggcagacccgatattgtccac
ttttgtttgctggaggcgctgggttctcccctcaaccaagccaacaagcttgagacatat
gtcgcgacaagaggcggactcgtcatttatgtgaacccgcgtgtgagactgccccgtgtc
tatgaacggtttaagggtgttgtggagaagcttttcgcggagggtgagataaggtctgag
acgggtgagacacttctaaggtgtgagaaaaaatctctcaaaaccttggcagaatccctc
aacccgtcgacgaaaattttgctgacggagagaggagagcctgtgaatgctcggggattt
tccgcggccttggcaggtcatacgaggcccctgattatggttggctgttttccccacggc
gacttcacatccgagaccaaatccctcgccgacaaaacccttgccatccaccaaacacct
ctcgaggcctggacagttatatcacgtgtgctctgctacatagaacaaaaccttatacct
ctctaa
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