KEGG   Candidatus Caldarchaeum subterraneum: CSUB_C0799
Entry
CSUB_C0799        CDS       T02904                                 
Name
(GenBank) flap endonuclease 1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
csu  Candidatus Caldarchaeum subterraneum
Pathway
csu03030  DNA replication
csu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:csu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CSUB_C0799
   03410 Base excision repair
    CSUB_C0799
   03450 Non-homologous end-joining
    CSUB_C0799
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csu03032]
    CSUB_C0799
   03400 DNA repair and recombination proteins [BR:csu03400]
    CSUB_C0799
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csu04147]
    CSUB_C0799
DNA replication proteins [BR:csu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    CSUB_C0799
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     CSUB_C0799
DNA repair and recombination proteins [BR:csu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     CSUB_C0799
Exosome [BR:csu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   CSUB_C0799
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc HHH_5 At5g48480-like_C
Other DBs
NCBI-ProteinID: BAJ50657
UniProt: E6N669
LinkDB
Position
771707..772741
AA seq 344 aa
MGVKIGDIIPGEAVEQTSLKRLSGKAIAFDAYNILYQFLATIRGPDGRPLMDRRGRVTSH
LSGLFFRTINFLQEGLLPVYVFDGRPPEEKYRTIEKRAVAREEAGKLYEAALAEGDLEAA
RRYAQRAASLEKYMVESAADLLKAMGVPYVMAPSEGEAQAAYMAAKGSVYAAGSQDMDSL
LFGSPRLVRNLSIVGRRKLPGRKEYVEVVPEIIYLDKLLASLGLTREQLIDIGLLVGTDY
SPQVRGVGPKTALKIVKEYGSLEKAVETGAVEVEFDVQTVRQLFLKPRVTDDYTLNWREP
SEEMVMELLVEEFDFSRERVGKALAELRQTLSKRSSSLDAFFSE
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgggtgtaaagattggggacatcattcccggcgaggctgttgagcagacttctttgaag
aggttgtcgggtaaggccatcgcgtttgacgcatacaacattctctaccagtttctcgca
accatccgtggccccgatggaaggcctctgatggatagacgaggcagggttactagtcac
ttgagcggcctcttcttcagaaccatcaactttcttcaggaggggctgttgcctgtctat
gttttcgacgggaggccgcctgaggaaaaatatcggactattgagaagagggcggtggcc
cgtgaagaggctggtaagctgtatgaggcggcgttggcagagggtgatttggaggctgct
cggcgatatgcccagcgtgcagcaagcttggagaaatacatggtggagagcgccgccgac
cttctcaaggccatgggtgttccctatgtgatggctccttcggagggtgaggcccaggcc
gcttacatggcggctaagggctctgtctacgccgccggctcgcaggacatggattctctt
ctcttcggctccccgaggctcgtcagaaacctctccatcgtgggacgtagaaagctgccc
ggccggaaggagtatgtggaggtggtgcccgagataatctatctcgataagcttctcgca
tcgcttgggttgacgagggagcagctgatagacataggtcttctggttgggactgattat
tcgccgcaggtcaggggtgttggacctaagacggctttgaagattgtgaaagagtatggg
tcgctggagaaggctgtggagacaggcgccgtggaggtcgagttcgacgtacagactgtc
aggcagcttttcttgaaaccaagggtgacagatgactatacgttgaactggcgtgagccg
tcggaggagatggtgatggagcttcttgtcgaggagtttgatttttcaagggagcgtgtc
ggaaaagcgttggccgagcttcggcagactttgtcaaagaggtctagcagtttagacgct
ttcttcagcgagtag

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