Candidatus Caldarchaeum subterraneum: CSUB_C0987
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Entry
CSUB_C0987 CDS
T02904
Name
(GenBank) exonuclease SbcCD, C subunit
KO
K03546
DNA repair protein SbcC/Rad50
Organism
csu
Candidatus Caldarchaeum subterraneum
Brite
KEGG Orthology (KO) [BR:
csu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csu03400
]
CSUB_C0987
DNA repair and recombination proteins [BR:
csu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CSUB_C0987
Archaeal homologous recombinant proteins
CSUB_C0987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_29
SbcC_Walker_B
AAA_15
AAA_27
DUF5339
DUF1290
THP2
Peptidase_M50
Motif
Other DBs
NCBI-ProteinID:
BAJ50840
UniProt:
E6N6X1
LinkDB
All DBs
Position
954550..956853
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AA seq
767 aa
AA seq
DB search
MVKLLSLYAYNFKKLRFDEPLRFSDGVTLISGLNEAGKSSILDAILYALYARVIRPPPEK
GKTRNEDIIAYGASKATVVLEFAVGDKRYRVSREIKRSGKPRANLDEILADNSLKPLAVG
QEKVTEQIEAILGGITFNELVSSTVVAQKELNKLIELRKEDRKKIINVFLNLESFNIVLE
NLEEQKRELEGTKERPGRLRVEKEKLESLREELEEYLKKKKEREDLVEERMKLLKNIEKT
EAEYAEAEKLYKMLQEYDEFLNRRQKLELEIEGKRKQLETLRKQRETLLKNIENTESDMH
RYRDLHLVEKELESLSKEYQQLVTLEHQIGEAREAETRLGIQVRSLEQQLPPSAKATALR
RPSIRPFAAGAAASIIIAFILLFIGSVLPALLFLAAGVVFLIIVFQRVSRLSRMMVLQET
LARLEQAREMHATARATLRNLIQNHSVKTSYLKNAFSSLPRYGELFQQKLVEGLPKAVEA
VLQQAEKDRQELNDLKSKLDAYREQLKNLPAEHELNQVESEIHSLGEQLEGVRLPTLSPG
LEFSRDVLEEARKRVQQLAENIQAYRTRTELLSQLVLELEEWLRAHGDVEQRYSEQLAVV
ANLERELAVVRKAVEAIQATAEALRNRVKPLVAAHMGIILPALTNNRYKAAILDDDYRLQ
VWDPDAGQYRVKEVFSGGTEDQMLLAMRLAFALALLPEAKGQKPEFVFLDEPLGSSDEVR
RSGIIEYIAIDLAKKFSQIFIISHVGGLEEHVNHIIRLHEGKVVETV
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagctgctaagcctctatgcctacaacttcaagaaactgaggttcgacgagccg
ttaaggttctcagacggcgtaacgctgatatcaggcctcaacgaggccggaaaatcctcc
atcctcgacgcaatactatacgccctctacgccagagtgataaggccgccgccggaaaaa
ggtaaaacaagaaacgaggacattatcgcatatggcgccagcaaagccacagtagtcctc
gagttcgctgtcggcgataaacgctacagggtaagcagggaaataaaacgaagcggaaaa
ccccgtgccaacctcgacgaaatcctcgcagacaattccctcaaacccttagccgtggga
caggagaaagtaaccgagcagatagaagccatactcggaggaataaccttcaacgaacta
gtttccagcaccgtcgtggcgcagaaggagctgaacaagctgattgagcttcggaaagag
gaccgaaaaaagataatcaacgtcttcctcaacctagaaagcttcaacatcgttctggaa
aatcttgaagagcagaaaagagagctggagggcactaaggagaggccggggcgtctgcgg
gtcgaaaaagaaaagctggaatccttgcgtgaagagctggaagaatacctgaaaaagaag
aaagaacgcgaagacctggtcgaggaaagaatgaagttgctcaaaaacatcgagaaaaca
gaggccgaatatgcggaggcggagaaactgtataagatgctgcaggaatacgatgaattt
ctcaatcggcggcaaaagctggagctcgagatagagggaaaacgaaaacagctggaaacg
cttcggaaacagagggaaacactgctaaagaacatagaaaacacggagagcgatatgcat
cgttaccgggacctgcatctcgtcgaaaaagagctggaatcgttgtcgaaagagtatcag
cagctggttactcttgagcatcagattggtgaggcgcgtgaagctgagacgcggctaggc
atacaggttaggagcttggagcagcagttgccgccgtcggctaaagcaacagcgttacgg
agaccgtctatccgtccatttgcagctggagccgcagcaagcatcatcatagcattcatc
ctcctgtttatcggcagcgttctcccagccctcctgttcctcgccgctggagtggttttt
ctaatcatcgtgtttcaacgggtttcgagactttctcgaatgatggttcttcaggaaaca
ctcgccagactcgagcaagccagggaaatgcatgccactgcaagggccacactcagaaac
cttattcaaaaccacagcgtaaaaacctcgtatctgaaaaacgccttctcatccctgcca
agatatggcgagctattccagcaaaaactcgtagaaggattgcccaaagctgttgaagcc
gtgttgcagcaggcggagaaagaccgccaagaactcaacgatctcaagtcgaagcttgac
gcttacagggagcagctcaaaaacctgccagcggagcatgagctcaaccaagtcgagagc
gagatacacagtctcggggaacagctagagggtgtaaggttgcccacgctgtctccgggg
ctggagtttagcagagatgtgctggaggaggcgaggaaaagggttcagcagctcgcagaa
aacattcaggcttacaggacgaggacggagttgctgtcgcagctggttttggagctggaa
gagtggctaagggcccacggcgacgtggagcagagatacagcgaacagttagctgttgtc
gcaaatctggagcgggagctggcagtcgtcaggaaggcggttgaagccatacaggccaca
gccgaggcgctgagaaacagggtgaaaccacttgtcgcagcgcacatgggaatcattctg
ccggctctcacaaacaaccgatacaaagccgcaatactcgacgacgactatcggctgcag
gtctgggaccccgacgcgggtcagtacagggtcaaggaggttttctcaggcggcacagag
gaccagatgctcctcgccatgaggcttgccttcgcattggctcttctccccgaagccaag
ggccagaaaccagagttcgtcttcctcgacgagccgctgggaagctccgacgaagtaaga
aggtcaggcatcatcgaatacatagccatagacctcgcgaaaaaattcagccaaatattc
atcataagccacgtaggcggcctcgaagaacacgtaaaccacatcataagactacatgag
ggaaaagtggtggaaacagtttag
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