Candidatus Caldarchaeum subterraneum: CSUB_C1097
Help
Entry
CSUB_C1097 CDS
T02904
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
csu
Candidatus Caldarchaeum subterraneum
Pathway
csu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CSUB_C1097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csu03021
]
CSUB_C1097
Enzymes [BR:
csu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CSUB_C1097
Transcription machinery [BR:
csu03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
CSUB_C1097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
CHASE7
Motif
Other DBs
NCBI-ProteinID:
BAJ50949
UniProt:
E6N7C0
LinkDB
All DBs
Position
1063219..1066983
Genome browser
AA seq
1254 aa
AA seq
DB search
MSTAASVAGIRFGILSPDLIRKMSVAEIISPDTYDEDGLPIPTSVMDPRLGTLEPGQRCK
TCGNTYLGCPGHFGRIELPVPVIHVGFAKTIYELLKSTCRSCGRILLPEDDCKKYHAELE
RLRANNLPFKNLIYKIKQKAMNTQVCPHCGEKQLKLELEKPTSFSEMSESGSTKLNPSTV
RARLERIPDADLVLLDINPQTSRPEWMVLTVLPVPPVYVRPSITLESGYRSEDDLTHKLV
DILRVTQRLRENIRAGSPSPVIEELSDLLQYHVTTYFNNEAVGVVPAKHRSGRILKTLAQ
RLKGKEGRFRLNLSGKRVDFSARTVISPDPNIRINEVGVPLEIAMQLTVAERVTPWNLEK
MRTLVRNGSDKYPGARYIIRPDGKRVRLKFVANLEELATALEPGYVVERHLQDGDIVLFN
RQPSLHRMSIMAHYVRVLPYKTLRLNPAVCTPYNADFDGDEMNLHVPQSEEAQTEARELL
VVENNIISPRYGAPIIGVIRDFLTSLYLLTRDETKLTKSELAMLLAAIKYRGPIPPPAVK
DPEPMWTGKQVFSLLLPKDFNHVTKSSFTNTEVVVKNGQLISGVIDKGSVGVEKANSILH
RLARDYGSDVARQFLDNVVRLANTFIELKGFSFAVDDLYVPDQIHSDIQQIFKKSETEFS
KLLAQYQTGEVEIPPGMTAEQAFEADVLKILSEARDSAGKLIRARVSQNSSAFIMAKTGA
RGTMLNLDQMIAVVGQQSVRRERVHRGYRKRVLSFFKQDDLSPRARGFVYNSFVSGLDPL
EFFFHAVGGRDGLVDTAVRTQQSGYMQRRLINALEALYIDYDGTVRTADEGRIIQFAYGE
DGVDPAKSDHGKAVTVSNIVNSVLASAYSGKPASQEYIEQKLQQASDKLNKKIIEELRAE
LRKTNPPAEAVDKIVEEVVSKYNASLAEPGDAVGVVTAQSIGEPGTQLTLRTFHFAGVGE
QSILKGLPRLIEIVDARRTPTTPIMYIPLTPEYASNLAKARKLAKQIQHTTLGDLISEVL
VNYKRGTLEVQLDAKSLEEHGVTKRDIEKALKGVGAEYDEEKRVISVKLDEEGLMDIARV
RERISSIKVKGIRRIKKATVFKEKDEYVIRTEGSNLREVMEVPGVDWRRIKTNDIYEIAE
VFGIEAARNAIVEEAKAVLEDQGLDVDIRHLLLLADMMTVSGSVKQIGRHGVVKLKSSVL
ARAAYEISVQTLLEAAARGEVDSLKGNVERILIGREIQVGTGMVTLLMSHEKGE
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgcagcgtctgtagcagggataaggttcggcattctgtcgcccgacctgata
agaaagatgagcgtggccgagattatcagccccgacacctacgacgaagacggcttaccc
atccccacaagcgtcatggacccgaggcttggaaccctcgagccagggcaaagatgcaaa
acctgtggaaacacctatctcggctgcccaggccattttggacgcatagagcttcccgtg
ccagttatacacgtcggcttcgcaaaaaccatctacgagctgctcaaatccacatgccgc
tcctgcggacggatactgcttcccgaggatgactgcaagaaatatcatgcggagttggag
aggctgcgtgccaacaacctgccattcaagaaccttatttacaaaataaagcagaaggct
atgaacacacaggtatgtcctcactgcggcgagaaacagctcaagctggagcttgagaag
cccacgtctttctccgagatgtctgaaagcgggtcgacgaagctgaacccgagcacggtt
agagcaaggctcgaaagaatacctgatgctgaccttgtccttctcgacatcaacccgcag
acctcgaggcctgagtggatggtgttaacggtgctgccggttccacctgtctatgtgagg
ccaagcataaccctcgaatcaggctatcggtccgaggacgacctcacacacaagcttgta
gacatcctcagagttacgcaacggctgcgggaaaacatccgcgccggctcgccttcacca
gtcatagaggagctttcagaccttcttcaataccatgttacaacctatttcaacaacgag
gctgttggagtggttcccgccaagcataggtctggcagaattctgaagacgttggcgcag
cgtctcaaggggaaggagggaaggttcaggctcaacctctccggtaaacgtgtagacttt
tcggcgcgcacagttatctcgcccgaccccaacatccgcatcaacgaggtgggtgttcct
ctggagattgccatgcagctcacggtcgccgagagagtgaccccctggaaccttgagaag
atgaggacgcttgtccgcaacggctccgacaaatatcccggggcaagatacatcataagg
cctgacggtaaacgggttaggctcaagtttgtcgcaaaccttgaagagctggctacagcc
ctcgagcccggctatgtcgtggaaagacatctgcaggatggtgacatagttctgttcaac
cgacaaccatctctgcacaggatgtccatcatggcacattatgtccgcgttctcccatac
aagacgctccgcctcaaccccgctgtctgcaccccatacaacgctgacttcgacggcgac
gagatgaacctccacgtgccgcagagcgaagaggcacagacagaagcccgtgaactactt
gtcgtcgaaaacaacataatctcaccaagatacggggcgccgatcatcggcgtaatcaga
gacttcctcacctcactctaccttttaacacgcgacgaaaccaagctgacaaaatcagag
ttagccatgttgctggcggctataaaatacaggggcccaattccgccgcccgctgtcaaa
gaccccgagcctatgtggacaggcaaacaggtcttcagcctactgttacccaaagacttc
aaccacgtcacaaaatcctccttcacaaacacagaggttgtggtcaaaaacgggcaactc
atctccggtgtaattgacaagggctctgtaggcgtcgagaaagcaaacagcatacttcac
aggctcgcccgcgactacggctccgatgtggcccgccagtttctcgacaacgtggtgagg
ctggcaaacactttcatcgagttgaaaggcttctccttcgccgtcgacgacctctacgtg
cctgaccagattcacagcgacatacagcagatattcaagaaatctgaaacagagttctcc
aagctccttgcacagtatcagacgggcgaagtggagattccgccgggaatgacggctgaa
caggcctttgaggcggatgtcctcaagattctgagcgaggcgagggattcggctgggaaa
ctcatcagggccagggtgtcgcagaatagctcggccttcatcatggctaagacgggtgcg
agaggcactatgcttaaccttgaccagatgatagctgtcgtgggtcagcagtctgtcaga
agagaacgtgtccacagaggctaccgcaaacgtgtgctcagcttcttcaagcaggatgac
ctttctccaagggcgcggggatttgtctacaactcattcgtctcaggccttgacccgctt
gagttctttttccacgccgtaggtggacgagacgggcttgtcgacaccgctgttaggacg
cagcagagcggatacatgcagcgccgactcataaacgccttggaggcactctacatagac
tacgacggcacggtgaggacagcggacgagggaagaattatacagttcgcctacggggag
gatggtgtcgacccagctaagtcagaccatggaaaagccgtgaccgtctccaacatagtc
aactccgttctcgcctcggcatactccggaaaacccgcctcccaagaatacatcgagcaa
aagctgcaacaggccagcgacaagctcaacaagaaaatcatagaagagcttcgcgccgag
ctaaggaaaacaaatccgcccgcagaagcggttgacaaaatagtggaggaagtcgtctca
aagtataacgcctcgcttgcagagcctggggatgctgtcggcgtggttactgcacagtct
ataggggagcctggaactcagttgacgctgcgaaccttccacttcgctggagtcggtgag
cagagcattctcaaggggctgcctcgtctcatcgagattgttgacgcacgtcggacaccg
actacaccaatcatgtacatacctttgacacccgagtacgcgtctaacctcgccaaggcg
agaaagctcgccaagcagatacagcacacaaccctcggcgacttgatttccgaggttctt
gtcaactataagcgggggacgctggaggttcagctcgacgccaaaagcctcgaagaacat
ggtgtgacaaagagagacatcgagaaagcgttgaaaggcgttggagcggagtatgatgag
gagaagcgtgttatatcggttaagcttgatgaagaaggtttgatggacatagcaagagtt
agggagagaatttcatccatcaaggtgaagggaatacgacgcatcaagaaggcaacagtc
ttcaaggaaaaggatgaatacgtcatcagaacagagggctccaacctaagagaggtcatg
gaggtgcctggcgtggactggagaagaataaagaccaacgacatctacgaaatagctgaa
gtcttcggcatcgaagccgcccgcaacgccatagtagaggaggcaaaggccgttctcgag
gaccagggcctcgacgtcgacatcagacatcttcttctcttggccgacatgatgaccgtc
agcgggagcgtcaagcagataggtagacacggtgttgtgaagctgaagagcagcgtgttg
gcgagggcagcctatgagattagtgtccagaccctgttggaagcggctgcgcggggagag
gtcgacagcctgaagggaaacgttgagagaattcttattggacgcgagatacaggttgga
acaggcatggtgacgctgttgatgagccacgagaaaggtgagtag
DBGET
integrated database retrieval system
