Candidatus Caldarchaeum subterraneum: CSUB_C1125
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Entry
CSUB_C1125 CDS
T02904
Name
(GenBank) DNA polymerase II large subunit
KO
K02322
DNA polymerase II large subunit [EC:
2.7.7.7
]
Organism
csu
Candidatus Caldarchaeum subterraneum
Pathway
csu03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
csu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CSUB_C1125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csu03032
]
CSUB_C1125
Enzymes [BR:
csu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CSUB_C1125
DNA replication proteins [BR:
csu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
D-family DNA polymerases
CSUB_C1125
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PolC_DP2_cat
PolC_DP2_central
PolC_DP2_N
CAP_N
Zn_ribbon_6
HNH_5
DZR
HypA
Motif
Other DBs
NCBI-ProteinID:
BAJ50977
UniProt:
E6PAL6
LinkDB
All DBs
Position
1087554..1090964
Genome browser
AA seq
1136 aa
AA seq
DB search
MDPGLEEYRSNILREVDRVYAVASAYRERTREPLPFVETVFADRMEERVELLVGPHGVAE
KIRRLRERLSGIELAFKLCEEIVYSSLGAESEEKVIHQAVCTALAVLTPPCITAAPSEGI
SHVRIKENDDGTRYLAVYFAGPIRAAGGTELASVVVLADYVRRLLGLDRFKAREEEVKRF
VEELRTYIRHVGRFQYSVPDKLIAYAYRMTPVEISGVATDEIPVPSFRDLERIETNYLRG
GALRVVNDGIVGRAKKVLNTVRSMKMSGWDWVEELAKASIKKEENGEEGSLEVIGGRPVL
SLADRFGGFRIRYGRAFSTGMAAYGIHPLTMRVLKGYIVTGTQLKTDFPGKGGIVTPVDV
IEPPVVKTRSGDVVKLTSEETFRKIADSIDRVLFLGDILVSVGDCVENNVELRPAGYCEE
WWLKDYLNMVASHGLENVAEKTGIPLKRLKLFAANPFTAKPTAEEALTLSIHTGIPLHPS
HLHFWTNITTHQINQLRTWLKTGLMHHGEKHVYRLDPDIKQILEAILLEHRIIDGKIILS
EQDQIVLSTLLRPGEEFEPFTDEGPLQFIHRISGVEVRDKRGSSLTARMGRPEKAGPRKT
SPAVHFLFPIGLAGGATRDIVSAKTSIVTVELVTRLCINCGKIGWRETCSECGSYTTLYG
VCRNCKKQFTEFVEKCDKCGEDVVFSAKQVVDLRAELSAALQKIGESAPPRLSGVKGLTS
RVKAPESFLKGLLRARYGLYVYKDGTVRFDATNAPLTHFTPRQIGVSVERLRSLGYLHDV
FGNPLVSDEQVLELKPQDIILSRKAAEHLVKVSRYIDDLLKHAGLEKLYNLRDIGDLVGQ
LVVGLSPHTYVGVVARVIGMLDADLNFAHPVFHAAKRRDCDGDEDSVMLLADVLMNFSRL
YIPDRIGGKMDTPLLVTRIVYPEDVDEQAHNVDVWSSIPAEFYQMSLRRAKGSEYRPLVH
ILGDDLAAGYGGTGIMYTHPQAALNVPDIVSAYKSLESMLEKISGQLALMDSLDAVRDAG
LVDSIVSSHILPDILGNVKAFMVQSFRCKKCNKKFRRLPLTGKCPSCQTDLSLTVFRGNV
EKYIELAKQMAEKNIRNTYLIERTLAAVENVVDLFTASKKPVEKTVQTRLEAFAAE
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
ttggacccgggtctggaggagtatcggagcaatattctcagagaggttgaccgtgtttac
gcggtggcctcggcatatagggagaggacacgtgagccgttgccttttgttgagacggtt
ttcgcggaccggatggaggaaagagttgagctgttggtggggccgcatggcgtcgccgag
aaaattagaaggctgcgggaacggctctcgggaatagagctcgcgttcaagctctgcgaa
gaaatagtttactcaagcctcggagcagagtccgaggaaaaagtcatccaccaagccgta
tgcacagccctcgccgtcctaacacctccatgcatcacagcagcgccctccgagggaatt
tcacatgtccgcataaaggaaaacgacgacggaacacggtatctcgcagtctacttcgcg
ggcccgattagggcggcgggcggcacagagctcgccagcgtcgtcgtcctcgcagactat
gtgcgtaggcttctggggcttgacaggttcaaggcacgcgaggaagaggttaaacgattt
gtcgaagagctccgcacctacataaggcatgtgggcaggtttcagtacagcgttcccgac
aaattgattgcctatgcttaccggatgacgcctgtcgagataagcggtgtagccacggat
gagatacctgtcccctccttccgcgacctcgaacgcatcgagacaaactatctacgcggc
ggcgcattaagagttgtcaacgacggcatagtcggccgagccaagaaggttttgaacacc
gtccgctcgatgaagatgtctggctgggactgggtcgaggaactggccaaagcatccatc
aagaaagaggaaaacggggaagagggttctctcgaagtcataggaggaagacctgttctc
tcactagccgataggttcggcggcttccggataaggtatggccgagccttctccacagga
atggccgcatacggcatacatcccttgactatgcgtgttctgaaaggatacatcgtgacg
ggaacacagttgaagaccgatttccctggaaaaggcggaatagtcacaccagtcgacgtc
atcgagccacccgtcgtcaaaacacgtagcggagacgtggtcaagctcacctccgaagaa
accttcagaaaaatagccgactcgatagatagggtgcttttcctcggcgacatccttgtc
tcggtcggtgactgtgtggagaacaacgttgagctgaggcccgcgggctactgtgaagaa
tggtggctgaaggattatctcaacatggttgcttcgcatggattggagaacgtagccgag
aagacgggcattccgctgaagcgtctcaaactgtttgccgcaaacccgttcaccgccaag
cccacagccgaagaagcgctcacgctaagcatccatacaggcatccccctgcatccaagc
cacctacacttctggacaaacatcacaacacatcaaatcaaccagttgagaacatggctc
aaaacaggactcatgcatcatggagaaaaacatgtctacagactcgacccagacatcaaa
caaatactcgaagccatcctgctcgaacaccggataatcgatggaaaaatcatcctctca
gaacaagaccaaattgtgttgtccacgttgctcaggcctggtgaagagtttgagccattt
acagatgagggcccgctccagtttatccataggatatctggtgtggaggtgcgtgataaa
cgggggtcgagcttgacggcgaggatggggcgacctgagaaagctggcccacgtaaaaca
agccccgccgtccacttcctcttccccatcggtctcgcgggcggagccacacgtgatata
gtgtccgcgaaaaccagcatcgtcacagtagagcttgtgacacgtctctgcatcaactgc
ggcaaaataggctggagagaaacatgcagcgaatgcggctcctacaccacgttatacgga
gtctgcagaaactgcaaaaaacagttcaccgaatttgtggagaaatgtgacaaatgcggc
gaagacgtagttttctcggctaagcaggtggtggacctacgtgctgagctttccgcggct
ttgcagaaaataggggagtctgcgcctcctcggctgagcggtgttaaggggttgacgagc
cgtgtgaaggctcctgaaagctttctgaagggtttgctgagggcgcgctacggcctctat
gtttacaaggatggaaccgtaaggtttgacgcgaccaacgctccgttgacccatttcacg
ccgcggcagataggtgtctctgtcgagaggctgcgcagcctcggatacctgcatgacgtc
ttcggaaacccgcttgtatccgatgaacaggttctcgagcttaagccacaggacattatc
ctcagcaggaaagcggcggagcatcttgtcaaagtttcacgctacatcgacgacttgctc
aaacacgcgggtctcgagaaactctacaaccttcgggacatcggcgacctcgtcggacag
cttgtcgtaggcctttctccacacacatacgtcggcgtcgtggcacgggtgatagggatg
ctggacgcagacctcaacttcgctcaccccgttttccacgcagccaaacgacgcgactgc
gacggcgatgaggacagcgtcatgcttctcgcagatgttttgatgaacttttcacgtctc
tacatccccgaccgcataggcggaaaaatggataccccccttctcgttacacggattgtg
tatccagaggatgttgacgagcaggcccataacgtcgatgtgtggagcagcataccagcc
gagttctaccaaatgtctctacgtagagccaagggaagcgaatacaggccgcttgtccat
atcctcggcgatgacctcgccgcaggctatgggggaacaggcatcatgtacacacatcca
caggccgcgttgaacgttcctgacatcgtctcagcctataaatcactggaatccatgctt
gagaagatttcagggcagcttgctttaatggacagcctcgacgcggtgcgtgacgcgggc
ctcgtcgacagcatcgtctcctcacacattctacccgacatcttgggaaacgtgaaagcc
ttcatggtgcagagcttccgctgcaagaaatgcaacaaaaaattccggaggctacctttg
acggggaagtgtccgagctgtcagaccgatttgtcgctaacagttttccggggaaacgtg
gagaaatacatcgagctcgcgaaacagatggctgagaaaaacatacgaaacacctatctc
atcgagaggacgctcgccgctgtcgagaacgttgtcgacctcttcaccgcctcgaagaaa
cccgttgagaaaactgttcagacaaggctcgaggccttcgcagctgagtag
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