Candidatus Caldarchaeum subterraneum: CSUB_C1151
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Entry
CSUB_C1151 CDS
T02904
Name
(GenBank) uracil-DNA glycosylase superfamily protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
csu
Candidatus Caldarchaeum subterraneum
Pathway
csu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CSUB_C1151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csu03400
]
CSUB_C1151
Enzymes [BR:
csu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CSUB_C1151
DNA repair and recombination proteins [BR:
csu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CSUB_C1151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAJ51003
UniProt:
E6N7E3
LinkDB
All DBs
Position
1114127..1114822
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AA seq
231 aa
AA seq
DB search
MSFEDLNNRIISCKLCPRLVKYREEVAKNPPKRFRGQTYWAKPLPGFGDVGARVLVLGLA
PAAHGGNRTGRMFTGDSSGDTLVRALHRAGFANMGRSISINDGLVLKDVYITAVVRCAPP
DNKPAKQEVENCLPYLIEELRMLENVVVVVALGRFAFETFFRLMRRMNAYSGRIPRFRHG
AVYRLNGSFNGKPLPTVIASYHPSRQNTSTGRLTQRMIDSVFHRVRAIAGL
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcgaggacctgaacaaccgcataatctcctgcaaactctgtccacgtctagta
aagtatcgggaggaggttgcaaagaatcctcctaagcgttttcgtggtcagacatactgg
gctaagcctttgccggggttcggggatgtcggagcacgtgtgcttgttctggggttggct
cccgctgctcatggcggaaacaggacgggcagaatgtttacaggggattcgagcggcgac
accttggtcagggccctgcatcgagccggtttcgccaacatgggccgcagcatctcgata
aacgatgggcttgtgctgaaagacgtctacataacagctgttgtccgctgcgcaccaccg
gataacaagccagccaaacaggaggtagaaaactgtctaccatacctaatcgaagaattg
aggatgctggaaaacgttgtcgtggttgtagctttgggcaggttcgcgtttgagaccttt
ttccgattgatgcgccgcatgaacgcctacagcggaaggattccacgattccgccacggc
gccgtctaccgtttaaacggctcattcaacggtaaacctctccccacagtcatagcctca
taccatccctcgagacaaaacacgagcactggccgtctcactcagcggatgattgactct
gtctttcatagggtaagggccatcgccggcttatga
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