Candidatus Caldarchaeum subterraneum: CSUB_C1203
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Entry
CSUB_C1203 CDS
T02904
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
csu
Candidatus Caldarchaeum subterraneum
Brite
KEGG Orthology (KO) [BR:
csu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csu03400
]
CSUB_C1203
Enzymes [BR:
csu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CSUB_C1203
DNA repair and recombination proteins [BR:
csu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CSUB_C1203
Prokaryotic type
CSUB_C1203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BAJ51054
UniProt:
E6PAU3
LinkDB
All DBs
Position
1169587..1170960
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AA seq
457 aa
AA seq
DB search
MEYFPDFLRPERVTSLAQAALDKRGEYLVYVMDASLRAYGNHALEYAVFEANRLGRSLVV
VYNLDEKQPFMNTRKLHFIHGALKKVDERLSRRGILFLVRKTESLLKLVNEAVSVVVDAG
YTGHQQTFRKTLAKYCDSVKMVEGDVVVPVKTASTRAEPYARTIRPKLLNKLDNFLETVP
EIPVKQSSTDLDIEGLRYETFEHLLKDFGSIEFVEPVKDVVGGEDEAHKRLETFVGERLD
RYAAERSDPGSEACSELSPYLRYGMISPVQVLKRVFEYRRRGDVNVESLINELVVWRELA
RNGEVYNPFFEKYEGLPEWARETLSIHAGDRREQVYSMSELERADTHDVYWNAAQQELLA
TGKIHNYMRMYWCKKLLEWTDSPETAYRYAVYLNNKYGLDAEDPNSYLGISWCFGAYDRP
FTESKIYGKVRRMTDQSLKRKKQINNYIQRWSAPAGI
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggagtattttccggatttccttaggccagagagagtaacaagtttggctcaagccgcc
ttggacaagcgtggcgaatatcttgtatatgttatggacgccagtctacgcgcatacggg
aaccatgccttggaatacgcggttttcgaggcaaataggctggggcgaagccttgtcgtc
gtctacaaccttgacgaaaaacagcctttcatgaacacgaggaagctgcattttatccat
ggagctttgaagaaagttgatgaacggctgagcagaagaggaattcttttcttggtccgc
aaaaccgagagcttgctgaaactcgtgaacgaggctgtgtcagttgtcgtcgacgctggc
tacacaggtcatcaacaaacctttagaaaaacgctggcaaagtattgtgactcggtgaag
atggttgaaggcgacgtggttgttcccgtcaaaacagcgtcgaccagagctgaaccctat
gccagaacaattaggcccaaacttctgaacaaactggacaacttcctagaaactgttccc
gagatacctgtaaaacaatcctccacagaccttgacatagaggggctgagatatgaaaca
ttcgaacatttgttaaaggattttgggtcaattgagtttgtcgaacccgtcaaagatgtt
gtaggtggtgaagacgaggctcacaaaaggttggagacttttgtaggagagaggctcgat
agatacgctgcggagcgcagcgaccctgggtctgaggcatgctcggagctgagcccctat
ctccgctacggaatgatatcgccggtccaggttctgaaacgcgtgtttgagtacaggaga
cgaggagacgttaatgttgaaagcttgatcaatgagctcgtggtttggcgagaactcgct
cgaaacggcgaggtctacaacccgtttttcgagaaatacgaagggttgcctgaatgggcc
agagagacgctcagcatccacgccggagaccgcagggaacaggtatacagcatgagcgag
ctggagagggctgatacccatgacgtttactggaatgcggctcagcaagagctactcgcg
accgggaagatacacaactacatgcgcatgtactggtgcaaaaaactgctcgaatggacg
gacagcccagaaaccgcctacagatacgcagtctatctcaacaacaaatacggactcgac
gccgaagaccccaacagctacctcggaataagctggtgcttcggagcatacgaccgaccc
ttcaccgaatcaaaaatctacggaaaagtacgcagaatgacagaccagagcttaaagaga
aaaaagcaaatcaacaactacattcaacgatggagtgctccggccgggatttga
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