Candidatus Caldarchaeum subterraneum: CSUB_C1392
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Entry
CSUB_C1392 CDS
T02904
Name
(GenBank) conserved hypothetical protein
KO
K02004
putative ABC transport system permease protein
Organism
csu
Candidatus Caldarchaeum subterraneum
Brite
KEGG Orthology (KO) [BR:
csu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csu02000
]
CSUB_C1392
Transporters [BR:
csu02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Putative ABC transporter
CSUB_C1392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsX
MacB_PCD
Motif
Other DBs
NCBI-ProteinID:
BAJ51243
UniProt:
E6NBB1
LinkDB
All DBs
Position
complement(1356840..1358081)
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AA seq
413 aa
AA seq
DB search
MKPGDYIKYAWSALKDRRLRTTLTVLGIVVGPALITALNATTAGLTQSIVSNLEVFGTDL
VLVQRVGDFNFDDNVVNYISSLQGVKETYPYYLIASGEIKTRGKTFPMDPTKSYTVLAVE
LRDLPKLFPNIKVDSGAIVDNPSAAVVGYNAWNPRDPDLPPIDVGSIFTVTPLSGTGTTR
SFTVTARLGKYGQSLFLNPDNQIFVSPEAGRLITNRRSYSGVFVKLTDPGYSDQVVLAIE
QKYGGDVRVFSITAIAATVQQIIGTLNVFFSTVASMSLLVAFLGIMTTMFTSVTERVREI
GLIKALGFRTRDVLLSFLSEAVIIGILGGVFGTAVGVVAAFALSGIFSGPPADTRPGSFV
TGPAGEGPRITPLISPELILMGVAVAVGVSVLAGMLPAYRASRFEPVEALRRE
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
gtgaagccgggtgactacatcaagtatgcgtggtctgcgcttaaggatagaaggctgcga
acaactctgaccgttctcggcatagttgtcggccccgcgttgatcacggcgctcaacgcc
accacagcgggcttgacacaatccatcgtctcgaatcttgaagtttttggaacagacctt
gtactcgtccagagagtgggcgacttcaacttcgacgacaacgtggtaaactacatcagc
tctctccaaggagtaaaagagacctatccatattatctcatagcgtcgggggagattaag
acccgtggaaaaactttcccgatggacccgacgaagtcatacacggttctcgccgtagag
ctgagagacctgcccaaactcttcccaaacatcaaagtcgactcgggggctattgtagac
aatccatcggcagcggtcgtgggctacaacgcctggaacccacgtgaccccgacctacca
cccatagacgtaggctccatcttcacggtgaccccgctttcgggaacaggcacaacacgc
tctttcacagtgacggcgcgtctcggcaaatacgggcaatcactgttcctaaaccctgac
aaccagatatttgtgtcaccggaggcggggaggctgattacaaaccggagaagctacagc
ggagtattcgtcaagttgacggaccccgggtatagcgaccaagtcgtcctcgccatagag
cagaaatatggaggagacgtacgcgtcttctctatcaccgcgatagccgcgaccgttcag
cagataatcggaaccctgaacgtctttttctccacggttgcttcgatgagcctcctcgtc
gcattcctcggaataatgacgacgatgtttacctcggtgacggaaagggttagggaaatc
gggttgattaaggctctgggcttccgcacccgagacgtgcttctaagcttcctctctgag
gcagtaataataggcatactgggaggcgttttcggaacagctgtcggcgtggtggcagcc
ttcgcactctcgggcatattctcaggcccgcccgctgatacacgtcccggaagctttgtc
acagggcctgcaggagaagggcctcggataactccgttgatatctcctgagctgattttg
atgggggtggctgtcgccgtcggtgtctctgttctcgccggaatgctgccagcttatcgt
gcttcgaggtttgagcctgttgaggctctccgaagagagtag
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