Candidatus Caldarchaeum subterraneum: CSUB_C1627
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Entry
CSUB_C1627 CDS
T02904
Name
(GenBank) transcriptional regulator, AsnC family
KO
K03718
Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Organism
csu
Candidatus Caldarchaeum subterraneum
Brite
KEGG Orthology (KO) [BR:
csu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csu03000
]
CSUB_C1627
Transcription factors [BR:
csu03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
CSUB_C1627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_AsnC-type
HTH_24
AsnC_trans_reg
AsnC_trans_reg_3
NirdL-like_HTH
HTH_20
TrmB
HTH_5
NapD
HTH_DeoR
HTH_Tnp_ISL3
MarR
AsnC_trans_reg2
HTH_11
HTH_IclR
Sigma70_r4_2
Sigma70_r4
HTH_23
HTH_Crp_2
FeoC
ACT_4
HTH_Mga
MarR_2
HTH_38
FaeA
HTH_27
AtzG-like
HTH_30
Motif
Other DBs
NCBI-ProteinID:
BAJ51478
UniProt:
E6N978
LinkDB
All DBs
Position
1561537..1561983
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AA seq
148 aa
AA seq
DB search
MVDELDLKILNILFEDGRASFADIGRKLGVSENTVRFRFQKLVKTGVIRKVTVLVDHVKL
GLKNSAALMLKIDPTKINRVLDELKQLREIANIYQLSGDFDAIAVAYGRDLDHIREIVEQ
IKKIPGIISVNTLVTLRVVKTDTRYGLV
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atggtcgatgaactggaccttaagatattgaatattcttttcgaggatggtagagcttct
ttcgccgacatcgggcgcaaacttggtgttagcgagaataccgtcaggtttcgttttcag
aagttggtgaagacgggtgttatccggaaggttaccgtgctggttgaccatgttaagctg
gggctgaagaactccgccgctctgatgctcaaaatagaccccacaaaaataaaccgtgta
ttggatgagctaaaacagctgcgcgaaatcgcgaacatctaccagctttcaggagacttc
gacgccatagcagttgcctacggccgcgacctcgaccacatacgggaaatagtggagcag
ataaaaaaaatcccaggcattatctcggtcaacacattggtaacccttagggtcgttaaa
acagacacacgctacggactcgtctaa
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