Candidatus Caldarchaeum subterraneum: CSUB_C1669
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Entry
CSUB_C1669 CDS
T02904
Name
(GenBank) transcription factor E
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
csu
Candidatus Caldarchaeum subterraneum
Pathway
csu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CSUB_C1669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csu03021
]
CSUB_C1669
Transcription machinery [BR:
csu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
CSUB_C1669
Prokaryotic type
Archaeal type
TFE
CSUB_C1669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
POLR3C_WHD
IBR
Acetyltransf_6
TrmB
HTH_9
DUF977
wHTH-PRTase_assc
TnsD
HypA
zf_C2H2_13
Sigma70_r3
Motif
Other DBs
NCBI-ProteinID:
BAJ51520
UniProt:
E6N9D0
LinkDB
All DBs
Position
1598082..1598588
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AA seq
168 aa
AA seq
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MMVVVDKESSLKIVGMIAGEEAVKIVGLLLDKPGLTDEDVSSMTSLDIKDVRRVLHRLNE
VGAVSYEVHRDKDTGHRIFRWRVQQEQLVGYAKTMIRKVLERLKARLEYESSNQMYWCGT
PGCGKYGFETAMELLFKCKTCGKPLTIYDNTAFVENLRNKIAELEKLA
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
ttgatggtggttgttgacaaggagtcgagcttaaaaatagtgggcatgattgccggggag
gaggctgttaagattgttgggctattgctggacaagccggggttgacggatgaagatgtc
tcatcgatgacgtcgctggacatcaaagatgtcagacgagttttgcacaggctcaacgag
gtgggagctgtttcttacgaggttcatagggacaaggatacggggcataggattttcagg
tggagggttcagcaggagcagcttgtcggatacgccaaaaccatgataagaaaagtgctc
gagaggttgaaggctcggctcgaatatgagtcaagcaaccagatgtactggtgtgggaca
cccggctgcggaaaatacggttttgaaacagccatggagctgttgttcaaatgcaaaact
tgtggaaaacctttgacaatctatgacaacacagcatttgtcgagaacctgcgaaacaaa
atcgcggagcttgaaaagctggcttga
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integrated database retrieval system
