Litchfieldia suaedae: IM538_00100
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Entry
IM538_00100 CDS
T08143
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
csua
Litchfieldia suaedae
Pathway
csua00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
IM538_00100 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csua01007
]
IM538_00100 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csua03016
]
IM538_00100 (serS)
Enzymes [BR:
csua01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
IM538_00100 (serS)
Amino acid related enzymes [BR:
csua01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
IM538_00100 (serS)
Transfer RNA biogenesis [BR:
csua03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
IM538_00100 (serS)
Prokaryotic type
IM538_00100 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
CC149
GAS
DUF2730
Motif
Other DBs
NCBI-ProteinID:
QOR66678
LinkDB
All DBs
Position
23489..24769
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AA seq
426 aa
AA seq
DB search
MLDIKLLRANFEEVKQKLQHRGEDLTDLGKFEELDAKRRELILKTEELKSKRNEVSAQVA
VLKREKQDADHLITEMREVGDQIKVLDDELRPLEEELELLLLSIPNIPHESVPVGETEDD
NVEARKWGELPEFAFEPKPHWEIADELGILDFERAGKVTGSRFVFYKGLGARLERALMNF
MLDLHVEEHGYEEILPPYMVNRASMTGTGQLPKFEEDAFLIESEDYFLIPTAEVPVTNFH
RDEILNGEELPFNYAAYSACFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYEELE
KLTGNAEKVLQLLGLPYRVLSMCTADLGFTAAKKYDIEVWIPSYGTYREISSCSNFEAFQ
ARRANIRFRRDPKAKPEHVHTLNGSGLAIGRTVSAILENYQQADGSVIIPEVLRPYMGNR
EVIGRK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatattaaattattaagagccaattttgaagaggtaaagcaaaagcttcagcat
cgaggagaagacttaactgacttagggaaatttgaagagctagatgcaaaacgcagagaa
ttaattttaaaaacggaagaattaaaaagtaaacgtaatgaagtatcagcacaagttgcg
gtattaaaacgtgaaaaacaagatgcagatcacctaatcactgaaatgagagaagttggt
gatcagataaaggtacttgatgatgagcttcgcccattagaagaggagcttgaactgtta
ttattatcaatccctaatattcctcatgaaagtgtgccagtaggtgaaactgaagatgat
aatgtagaggctcgtaagtggggagagttacctgagtttgcatttgaaccaaaaccgcat
tgggaaatcgctgatgaacttggaatcctagattttgaacgagcagggaaggttactgga
agccgttttgttttttataaaggcttaggtgctagacttgaacgtgcattaatgaacttt
atgttagatcttcacgttgaagaacatggttatgaagaaatcttacctccttacatggtg
aatcgcgcaagtatgacagggacaggtcagttacctaaatttgaagaagatgcattttta
attgaaagtgaagactacttcttaataccaacagctgaagttcctgtaacaaactttcat
cgtgatgagatattaaacggagaagaactgccgtttaactatgcagcatatagtgcatgt
tttagatctgaagcgggttcagctggacgtgatacaagaggattaattcgtcagcatcag
tttaataaagtggaacttgttaaatttgtaaaaccagaggattcttacgaagagttagag
aaattaactggtaatgcggaaaaggtgctacaattacttggacttccataccgagtgtta
agcatgtgtactgctgatctaggatttacagcagcaaagaaatacgatattgaagtttgg
attccaagctatggaacataccgagaaatttcttcttgtagtaactttgaagctttccaa
gcacgtcgtgcaaacattcgtttccgtcgtgacccgaaggctaaaccagagcatgttcat
acgttaaatggatctggtcttgctattggacgtacagtgtctgctatattagaaaattat
caacaggctgatggtagtgtcattattccagaagttcttcgtccatacatgggaaatcgt
gaggttattggacgtaagtag
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