Litchfieldia suaedae: IM538_00140
Help
Entry
IM538_00140 CDS
T08143
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
csua
Litchfieldia suaedae
Pathway
csua03030
DNA replication
csua03430
Mismatch repair
csua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IM538_00140 (dnaX)
03430 Mismatch repair
IM538_00140 (dnaX)
03440 Homologous recombination
IM538_00140 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csua03032
]
IM538_00140 (dnaX)
03400 DNA repair and recombination proteins [BR:
csua03400
]
IM538_00140 (dnaX)
Enzymes [BR:
csua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IM538_00140 (dnaX)
DNA replication proteins [BR:
csua03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IM538_00140 (dnaX)
DNA repair and recombination proteins [BR:
csua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IM538_00140 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_assoc_2
AAA_22
DnaX_C
TIP49
AAA_30
AAA_5
AAA_16
AAA_19
AAA_7
Rad17
AAA_24
DNA_pol3_delta_C
Mg_chelatase
Receiver_CRE1
AAA_18
RCF1-5-like_lid
Dit_like
PIF1
CecR_C
Motif
Other DBs
NCBI-ProteinID:
QOR66683
LinkDB
All DBs
Position
29649..31343
Genome browser
AA seq
564 aa
AA seq
DB search
MAYQALYRVYRPKTFQDVVGQEHITKTLQNALLQEKFSHAYLFSGPRGTGKTSAAKIFSK
AVNCERAPISEPCNECDSCRGISDGSISDVIEIDAASNNGVDEIRDIRDKVKYAPSAVKY
KVYIVDEVHMLSIGAFNALLKTLEEPPKHVIFILATTEPHKIPLTIISRCQRFDFRRINA
QAIVQRMKVIIENQEIEVEEQALHVIARAAEGGMRDALSLLDQAISYSDEVVRFEDVLSI
TGSVSQTFLTNLVEAIDQKNVQVALKTLDELMNHGKDPLRFIEDLIFYYRDMLLYQTAPN
LEETLERVMVDDHFTALAEKIHKGSIYEIIDILNKCQQEMKWTNHPRIFLEVAIVKLCQQ
DGLQEVQTVPQIDTLLNRITQLENELQHLKEKGIAVSNDGTAQPERKPQKTAARSGYKTP
TGRLIEILKHATRPDLELLKSKWGAMLEQLRQQNKVSHAALLIDSEPVAASNTAFVLKFK
YEIHCKMVAENNNNVRDNLENILFELTNKRFEMVAVPDDEWGKIREEFLRGQRSEETSNE
EEEEDPLIAEAKKIVGTELIEIQE
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
gtggcgtatcaagcattatatcgtgtttatagaccaaaaacatttcaagatgtcgtagga
caagagcatattacgaaaacactgcaaaatgcccttctacaggaaaaattttcacatgct
tatctattttctggccctagaggtacaggtaagacaagtgctgcgaaaatcttttcaaaa
gcagtaaactgtgaaagagcacccatatctgaaccgtgtaatgagtgtgactcatgtaga
ggaatctcagatggttctatttcagacgttattgaaatagatgctgcatccaacaatggt
gttgatgaaattcgtgatattcgggataaagtgaagtatgcaccaagtgcagttaagtac
aaggtctatattgttgatgaagtacatatgctttcgattggtgcgtttaatgcattatta
aaaacactagaagaaccaccaaaacatgttatttttattttagcaacgaccgaaccacat
aagattcctctaacaatcatttctaggtgccagcgctttgattttagacgaattaatgct
caggctattgttcaaagaatgaaggttattattgaaaatcaagaaatcgaagtagaagag
caagccttacacgttattgcacgagcagctgaaggtggaatgcgagatgctcttagcttg
ttggatcaagccatttcttatagtgatgaagtagttcggtttgaagatgttctatctata
acaggttcagtgtcacaaacattcttaacgaatttggtagaggccattgatcaaaaaaat
gtccaagtagcattaaaaacgttagatgaattgatgaaccatgggaaagatcctttaagg
tttatagaagatttaattttttattaccgtgatatgcttctttaccaaacagctccaaat
cttgaagagacacttgagcgtgtgatggtcgatgatcactttactgctcttgctgaaaaa
atacataaaggttcaatctatgaaataatagatatactaaacaaatgtcagcaggaaatg
aagtggacaaatcaccctcgaattttcttagaagttgctatcgtaaaattatgtcaacaa
gatgggttacaagaggtgcaaactgtaccacaaattgatacactattgaatagaataact
caattagaaaatgaacttcaacacctgaaagaaaaaggaattgcagtttcaaatgatgga
actgctcaacctgagcgcaagccgcagaaaacagcagctagaagcgggtataaaacacca
actggaaggttgattgagattctgaagcatgcaacacgcccagacttagaattactaaag
tcaaagtggggggcaatgcttgaacaattaaggcaacaaaataaggtatcacatgcagca
ttactaattgatagtgaaccagtagcagcttcaaatacagcattcgttttaaaattcaaa
tatgaaattcattgtaaaatggtcgctgaaaacaataataatgttcgcgataaccttgaa
aacattttatttgaattaacgaataagcgatttgaaatggttgcagtccctgatgatgaa
tggggtaaaataagagaagagtttttacgtgggcaacgtagtgaagaaactagcaatgag
gaagaagaagaagatccacttattgcagaagcaaagaaaattgtaggtacggagctcatt
gaaatacaagaataa
DBGET
integrated database retrieval system
