Litchfieldia suaedae: IM538_01210
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Entry
IM538_01210 CDS
T08143
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
csua
Litchfieldia suaedae
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
IM538_01210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_N
Tex_central_region
HHH_3
HHH_9
S1
HHH_7
YqgF
T2SSK
S1_RRP5
HHH_6
UTP15_C
TOBE_2
Herpes_UL74
Motif
Other DBs
NCBI-ProteinID:
QOR66845
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Position
216412..218583
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AA seq
723 aa
AA seq
DB search
MQETLHKDDLLIKTIAKELTIKEKQIKNVIDLLTEGNTVPFIARYRKEQTGALDEVQIRD
IQEKWQYMQNLETRKEEVIRLIEEQGKLTEELKGQITKSTKLQQVEDLYRPYKQKRRTKA
TVAKEKGLEPLAEWMFSFPVGIQIEEKAKEFLSEEKEVNSVEEAIQGAKDIIAEWISDDA
NYRQWIRTETFRKGKIVSVAKDEEKDEKKVFEMYYEYEEPISKVVPHRVLAMNRGEKEEV
LRVSIEPPVDLVLSYLQKQIIKTQTTTVLNQVIETIEDSYKRLIQPSIEREIRKELTEKG
EDRAIHIFSENLRNLLLQPPLKGKMVLGVDPAYRTGCKLAAVDETGKLLKVDVIYPHPPV
NKKEAAKEKFKAYINEFNIEMVAIGNGTASRETEQFVAETLKEFTREIFYLIVNEAGASV
YSASDLAREEFPNLQVEERSAVSIARRLQDPLAELVKIDPKSVGVGQYQHDVSQKKLSDS
LTFVVETVVNKVGVNVNTASPSLLQYVAGLSKAVATNIVKQREENGKFVSRKELKTIPRL
GAKTYEQCIGFLRIMDGDQPLDRTSIHPESYKDVEKLLKRIGVTVKDIGSEQVKEGISQV
SVEELAAELNIGELTLKDIIDSLIRPSRDPRDELATPLLKKDILQLEDLKKGMELEGTVR
NVVDFGAFVDIGVKQDGLVHISKLSPNFVKHPLDVVSVGDVVKVWIDDVDAIKGRVALTM
LPQ
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
ttgcaggaaaccttacataaagatgatctattgattaaaacaattgcaaaagagctcacc
attaaggaaaaacaaattaaaaatgtaattgacttattaacagaaggtaatacagttccg
ttcatcgccaggtatcgtaaagaacaaacaggtgcattggatgaggttcaaattagggat
attcaagaaaaatggcaatacatgcaaaaccttgaaacaagaaaagaggaagttatacgc
ctcattgaagagcaagggaaattgacggaagaactaaaggggcaaattacgaaatctaca
aaattacaacaagtagaagatttataccgcccttacaaacaaaagaggcgtacaaaagca
acagttgctaaagaaaaagggctagagcctctagcagaatggatgttcagctttccggtt
ggtatccagatagaagagaaggctaaagaatttctttctgaagaaaaagaagtgaactca
gtagaagaagctattcaaggtgcaaaagatatcatcgctgaatggatatctgatgatgct
aattaccgtcagtggatacgaacagaaaccttcagaaaaggtaaaattgtctcggtggct
aaggatgaagaaaaagacgaaaagaaagtgtttgagatgtactatgaatatgaggaacct
attagtaaggtagttccacatcgtgtacttgcaatgaaccgtggggaaaaggaagaggtg
ctacgtgtttcaattgaacctccagttgacctggttctttcttacttacaaaagcaaatc
ataaaaacacagactactactgtattaaatcaggtaatagaaaccattgaggatagctat
aagaggttaatccaaccttccattgaacgagaaattcgaaaagaactcacggaaaaaggt
gaagaccgtgccatacatattttctcagagaacctccgtaacttattattacaaccgcca
ttaaaaggaaaaatggtgctaggagttgacccggcctatcgtactggttgtaagcttgct
gcggtagatgagacgggaaaacttttgaaagtagatgtgatttaccctcaccctcctgta
aataaaaaagaggctgcaaaagaaaagttcaaagcttacattaatgaattcaatattgaa
atggttgctataggaaacggaactgcttcgagagaaacagaacagtttgttgcagaaact
ttaaaagagtttacacgtgaaattttctacttaattgttaatgaggctggagctagtgtt
tactctgcttctgatttagcaagagaggagtttcctaaccttcaagtagaagagcgaagt
gctgtttctattgcaagacgtctgcaagaccctttagcagagcttgttaaaattgatcca
aaatccgtaggggttggtcaatatcaacatgatgtctcccaaaagaaactttccgattca
ttaacctttgtagtagaaacggtagtaaataaagtcggagtaaatgtaaataccgcatca
ccgtcgctattacaatatgtagcggggctttccaaagccgtggcaaccaatattgttaag
caaagagaagagaatggaaaatttgttagtagaaaagagttaaaaacaattcctagactt
ggagcaaagacatacgagcagtgtattggtttcttaagaatcatggatggagatcaacct
ttagatcgaactagtattcaccctgagagctataaagatgttgaaaagcttttaaaaagg
attggagtaacagttaaagacattggtagtgagcaagttaaggaaggtatttctcaagtt
tctgttgaagaactagctgcggagttaaatatcggggaattaacgttaaaagatatcatt
gactccctgatccgtccgtcccgagacccaagggatgagctagcaacgcctttactgaaa
aaggacatccttcagcttgaagatcttaaaaagggaatggaactagaagggacagttcga
aatgtagtagatttcggagcatttgttgatatcggtgtgaaacaagatgggttagtccat
atctcaaaattaagccctaacttcgtaaagcacccattggatgtggtttcagtgggggat
gttgtgaaggtttggattgatgatgtagatgcaatcaaaggtagagttgcactaactatg
cttccgcaataa
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