Litchfieldia suaedae: IM538_01375
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Entry
IM538_01375 CDS
T08143
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csua
Litchfieldia suaedae
Pathway
csua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IM538_01375 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csua03019
]
IM538_01375 (groL)
03110 Chaperones and folding catalysts [BR:
csua03110
]
IM538_01375 (groL)
03029 Mitochondrial biogenesis [BR:
csua03029
]
IM538_01375 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csua04147
]
IM538_01375 (groL)
Enzymes [BR:
csua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
IM538_01375 (groL)
Messenger RNA biogenesis [BR:
csua03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
IM538_01375 (groL)
Chaperones and folding catalysts [BR:
csua03110
]
Heat shock proteins
HSP60 / Chaperonin
IM538_01375 (groL)
Mitochondrial biogenesis [BR:
csua03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
IM538_01375 (groL)
Exosome [BR:
csua04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
IM538_01375 (groL)
Exosomal proteins of other body fluids (saliva and urine)
IM538_01375 (groL)
Exosomal proteins of breast cancer cells
IM538_01375 (groL)
Exosomal proteins of colorectal cancer cells
IM538_01375 (groL)
Exosomal proteins of bladder cancer cells
IM538_01375 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QOR66860
LinkDB
All DBs
Position
236587..238218
Genome browser
AA seq
543 aa
AA seq
DB search
MAKEIKFSEDARRSMLRGVDALANAVKVTLGPKGRNVVLEKKYGSPLITNDGVTIAKEIE
LEDAFENMGAKLVAEVASKTNEIAGDGTTTATVLAQAMIREGLKNVTAGANPMGIRKGIE
KATKVAVEELQAISKPIEGKASIAQVASISAADEEVGQLIAEAMERVGNDGVITIEESKG
FSTELEVVEGMQFDRGYASPYMVTDSDKMEAVLDNPYILITDKKIASIQEILPVLEQVVQ
QGKPLLLVAEDVEGEALATLVVNKLRGTFNAVAVKAPGFGDRRKAMLEDIATLTGAEVIT
EDLGLDLKSANITQLGRASKIVVTKENTTIVEGAGDSAKIAARVNQIRVQLEETTSEFDK
EKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVSGGGTALVNV
YNKVAEITAEGDEQTGINIVLRALEEPVRQIAHNAGLEGSVVVERLKHEEIGVGFNAATG
KWVNMIEAGIVDPTKVTRSALQNAASVSAMFLTTEAVVADLPEEKGSAMMPGMDGMGGMG
GMM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagaaattaaatttagtgaagatgctcgtcgctctatgcttcgtggtgtagat
gcactagctaatgctgttaaagtaacattaggaccaaaaggacgtaacgtggttcttgaa
aagaaatatggttcgccacttattactaatgatggtgtaacaattgcaaaagaaatcgag
ttagaagatgcattcgaaaacatgggtgctaaattagtagctgaagttgctagcaaaaca
aatgaaattgctggtgacggtacaacaactgctacagttcttgctcaagcaatgatccgt
gaaggtcttaaaaacgtaactgctggtgctaacccaatgggaatccgtaaagggattgaa
aaagcaactaaggttgctgttgaagagttacaagcgatttctaaaccaatcgaaggtaaa
gcttctatcgctcaagtagcatctatttctgcagctgacgaagaagtaggtcaattaatt
gctgaagctatggagcgcgttggtaacgatggtgttatcactattgaagaatctaaagga
ttctctactgagcttgaagtagtagaaggtatgcagtttgaccgtggatatgcttctcca
tacatggtaactgattctgataaaatggaagctgttttagacaatccatatatcttaatc
actgacaaaaagattgctagcattcaagaaatcttacctgtactagagcaagttgttcaa
caaggtaagccactattattagtagctgaagacgttgaaggtgaagctctagcaactcta
gttgtgaataagcttcgtggaacattcaatgcagttgctgttaaagctcctggatttggt
gaccgtcgtaaagcaatgctagaagacatcgctactctaactggtgctgaagtaattact
gaagatttaggtttagatcttaagtctgctaacatcactcaattaggtcgtgcttctaaa
atcgtagtaactaaagaaaacactacaatcgttgaaggtgcaggagattctgctaaaatt
gcagctcgtgttaaccaaattcgtgttcaattagaagaaactacttctgaatttgacaaa
gaaaaattacaagagcgtcttgctaaattagcaggtggtgttgctgtcattaaagttggt
gctgcaactgaaactgaattaaaagagcgcaaacttcgtattgaagatgctctaaactct
actcgtgctgcagtagaagaaggtatcgtttctggtggtggtactgcattagtgaacgta
tacaacaaagttgctgaaatcactgctgaaggtgacgagcaaactggtatcaatatcgtt
ctacgtgcacttgaggagccagtacgtcaaattgcacacaacgctggtcttgaaggatct
gtagttgttgagcgtctaaaacatgaagaaatcggtgttggtttcaacgctgcaactgga
aaatgggtaaacatgatcgaagcgggtatcgttgacccaactaaagttactcgttcagca
cttcaaaacgctgcatctgtttcagctatgttcttaacaactgaagctgtagtagccgat
cttccagaagaaaaaggttctgctatgatgccaggtatggacggcatgggcggaatgggc
ggcatgatgtaa
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