Litchfieldia suaedae: IM538_01550
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Entry
IM538_01550 CDS
T08143
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
csua
Litchfieldia suaedae
Pathway
csua03420
Nucleotide excision repair
csua03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IM538_01550 (pcrA)
03430 Mismatch repair
IM538_01550 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csua03400
]
IM538_01550 (pcrA)
Enzymes [BR:
csua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IM538_01550 (pcrA)
DNA repair and recombination proteins [BR:
csua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IM538_01550 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
IM538_01550 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
QOR66890
LinkDB
All DBs
Position
280492..282765
Genome browser
AA seq
757 aa
AA seq
DB search
MQFISERLLSGLNKEQQEAVKATDGPLLIMAGAGSGKTRVLTHRIAYLMAEKEVAPWNIL
AITFTNKAAREMKERVHKIVGPVAEDIWISTFHSMCVRILRRDIDRIGINRNFTILDTTD
QLSVIKNILKDKNIDPKKFDPRSLLGSISSAKNELTTAEDYAKTAGGMYDGVVSSVYTEY
QKRLKKNQALDFDDLIMTTIQLFTRIPEVLEFYQRKFQYIHVDEYQDTNRAQYMLVKLLA
SRFKNICVVGDSDQSIYRWRGADISNILSFEKDYTHATTIMLEQNYRSTQRILRAANEVI
EKNSNRKPKKLWTENMEGNNITYFRADSEFLEGQFVAGKIKQLVDSGDRKYSDFAILYRT
NAQSRVMEEVLLKSNINYTIVGGIKFYDRKEIKDILAYLRVVANPDDDISLTRIINTPKR
GVGASSVDKIANYATAHDLSMFQALEEIEQIGLSGKIYNALVEFRNQINNWVNMQEYLSV
TELVDEVLDKTGYREMLKTEKTLEAQSRLENIDEFLSVTKNFEEKNEDKSLVAFLTDLAL
VADIDKLEEDDQNKGDAVVLMTLHSAKGLEFPVVFLIGLEEGVFPHSRSLMEEDEMEEER
RLAYVGITRAEEELFITNAQMRTLFGRTNMNPVSRFISEIPADLIEDLREKLMEEERQQR
QQRQQRQQRSQTSPFDISSFSNTRQPERRATISTSMSSTGGDEIGWKVGDKAAHKKWGVG
TVVSVKGEGESKELDIAFPSPVGIKRLLAKFAPITKE
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttatcagtgaaagattactttccggtttaaataaagaacaacaagaagcagtt
aaagcaacagatggtccactcctaatcatggctggagcaggaagtggaaaaacaagagta
cttacccatcgaatcgcctatttaatggctgaaaaagaagttgcaccttggaacatttta
gcgattacctttacaaataaggctgctagagaaatgaaagaaagggtccacaaaatagta
ggaccagtagcagaagatatatggatttctaccttccactccatgtgtgtaagaatcctg
agaagggatatagatcgaatcggtattaaccgtaatttcacgatattagatacaaccgat
cagctttcggttattaaaaacattcttaaagataaaaacatagacccgaaaaaatttgat
cctcgtagtcttttagggtctattagcagtgcgaaaaatgaattaacgaccgcagaagat
tatgctaaaacagcaggtggcatgtatgacggggttgttagtagtgtctacactgaatat
cagaaacggctaaagaagaaccaggcactagattttgatgatctcattatgactaccatt
caattatttactaggattcctgaggtgcttgaattttaccagcgcaaatttcaatatatc
catgttgatgagtatcaggatacaaaccgtgcgcaatacatgttagtgaaactactagca
tctaggttcaaaaatatatgtgttgtaggtgactcagatcaatccatttatcgttggcga
ggagcggatattagcaatatcctttcatttgaaaaggattatactcatgctactaccatc
atgcttgagcaaaattaccgttctactcaaagaattctacgtgccgcaaatgaagtaatc
gaaaagaactccaatcgtaagcctaagaaattatggactgaaaatatggaaggcaacaat
attacgtatttccgtgcggatagcgaatttctagaggggcaatttgttgcagggaaaata
aagcaattagtagatagtggtgatagaaaatactcagatttcgccattttataccgaaca
aatgctcaatcgcgtgtaatggaggaagttttacttaaatcaaatattaattacacaatt
gttggtgggataaagttctatgacagaaaagaaatcaaggatattcttgcttatttacgc
gtagtcgctaatcctgatgacgatattagcttaacaaggattataaatacccctaaacga
ggtgttggtgcttcttcggttgacaagattgcaaactatgcaactgcacatgatttatcc
atgtttcaggcattagaagaaatcgagcagataggattaagcggcaaaatctacaatgct
ctcgttgaattccgtaatcaaattaataattgggtcaacatgcaagagtatttatcggtg
actgaattagtggatgaggtattagataaaacaggttaccgtgaaatgctaaaaaccgaa
aaaacactcgaagcacaaagtagacttgaaaacatcgatgagtttctatctgttacaaag
aactttgaagaaaaaaatgaagataaaagtttagtcgcgttcttaaccgatttggctctc
gttgcagatattgataaattagaagaagatgatcaaaacaaaggcgatgcagtagtacta
atgactttacactcagccaaaggactagagttccctgttgtatttttgattggtcttgag
gaaggtgtattcccgcatagtcgttccttaatggaagaagatgaaatggaagaagaaaga
cgtcttgcatatgtaggaatcacaagagctgaagaagaactgtttatcacaaacgcacaa
atgagaactttatttggacgtacgaatatgaatcctgtttctcgttttataagtgaaatt
cctgctgatctaattgaagatttgcgtgaaaagttaatggaagaagaaaggcaacaaagg
cagcaaagacaacaaagacagcaaaggtcgcaaacttcaccatttgatatttcatcattt
tcaaatactagacagcctgaaagaagagcaacgattagcacaagtatgtcttcaactggt
ggagatgaaatcggctggaaagtaggagacaaggcagcccataagaaatggggagtaggt
acagtggttagtgtgaaaggcgaaggagaatccaaggagttagatattgcctttccaagt
ccggtaggtataaagagactactggctaaatttgcaccgattactaaagaatag
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