Litchfieldia suaedae: IM538_02205
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Entry
IM538_02205 CDS
T08143
Symbol
abc-f
Name
(GenBank) ABC-F type ribosomal protection protein
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
csua
Litchfieldia suaedae
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
csua03012
]
IM538_02205 (abc-f)
Translation factors [BR:
csua03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
IM538_02205 (abc-f)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
NB-ARC
AAA_22
AAA_23
RsgA_GTPase
MMR_HSR1
NACHT
AAA_16
ATP-synt_ab
AAA_24
AAA
AAA_15
AAA_30
MobB
AAA_7
RNA_helicase
nSTAND_NTPase5
AAA_13
DUF87
AAA_14
Motif
Other DBs
NCBI-ProteinID:
QOR67010
LinkDB
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Position
426368..428251
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AA seq
627 aa
AA seq
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MIVCNVHEISKMFGGNLVFEGISFEIHENDRVGMVGRNGSGKTTIFQLLAGLEAPDTGQI
HFRKGLKVGYLAQIPEFPEGSVVLDVLMSAFTGVKGLEEKMKDLEEQMASEKDENVLGKL
IVKYGDIQEQFTRLGGYEIEANVMKIASGLEIETMLNQVFSNLSGGEKTKVCLGLILLQA
PDLLLLDEPTNHLDIFAVEWLEAFLRDYPGAVVVISHDRYFLDEVVTKVIDLEDRELTVY
HTNYTNFLKEKEERLLLEFQAYQEQQKKIKKMKETIKRLREWANQANPPNAGLHRRARSM
EKALERIEKLKRPVLDRKKMGLQFESASRSGKDVVVVKDVSTAYGDKVLLRNANMTLHFG
ERAAIVGQNGTGKSTLLKQILREIPTQSGEISVGGSVEIGYLSQHVYAKDPNQTVIEAFR
DEVHVNEGDARHILATFLFYGHAVFKKVNQLSGGERMRLRLAQLMYQNVNLLILDEPTNH
LDIESREVLEDALEDYSGTILAVSHDRYFLNKLFQKTYWIRNQTLYNFVGNYDWAKRKLQ
EQTQEIESVPELKDMPEKVVKPKTTNQSYQMNEIERQLEEVEKVLYDLDQSLLLEQNLEK
LQNLYEQKSKLEGARDELYEKLEKLLA
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtatgtaatgtacatgaaataagtaaaatgttcggtgggaatctggtctttgaa
ggaatttcatttgaaatccatgagaacgacagagtggggatggtagggcgtaatggaagt
ggaaagaccaccatttttcaactattagcagggcttgaggcaccagatacaggacaaatt
cactttcgtaagggactgaaagttgggtatttagctcaaattccagaatttcctgaaggg
tctgtagttctggatgtgttgatgagtgcttttacaggagtaaaaggtcttgaagaaaag
atgaaagatttagaggaacaaatggcgagtgaaaaagacgagaatgttcttggaaaactc
atagtaaaatatggtgatatacaggaacaattcactcgtcttggtgggtatgagatagaa
gccaatgtaatgaaaattgcttctggattagaaatagaaaccatgttaaatcaagttttt
tcaaatctgagtggaggagaaaagacaaaggtatgtttagggttaatcctacttcaagcc
cctgacttattgctattagatgaaccaacaaaccatctagatatctttgctgtggagtgg
cttgaggccttcttgcgtgattaccctggtgcagtagttgtcatttctcatgaccgttat
ttcttagatgaagtggtaacaaaagtgattgatttagaagatcgtgagttgaccgtctac
catacaaattacacgaacttcctaaaggaaaaggaagaaaggttgctacttgaatttcag
gcttatcaggaacaacagaaaaaaattaagaaaatgaaagaaacgataaagcgattaaga
gaatgggctaaccaagccaatccacctaacgcaggcttacatcgtcgagcccgaagtatg
gagaaagcattagaaagaattgaaaaattaaaacgtccagttttggaccgaaaaaagatg
ggcttgcaattcgaatctgcatctagaagtggaaaggatgtcgttgttgtaaaagacgta
tcaacggcttacggtgataaagtgttattacgaaatgcaaatatgaccctacatttcgga
gagcgtgctgcaatcgtaggtcaaaatgggaccgggaaatctaccttactaaaacaaatt
ttaagagagattccaacgcaaagcggggagatatcagtaggtggaagtgtggaaattggc
tacctttcacagcacgtgtatgcaaaagatccaaatcaaaccgtgatagaagcatttagg
gatgaggttcatgtaaatgaaggagatgccaggcatatattagcgacatttttattttac
gggcatgcggttttcaaaaaggtgaaccaattaagtggaggagaaagaatgagacttcga
ttggctcagttgatgtatcaaaatgtaaatctccttatcttagatgaaccgacaaatcac
ttagatattgaatcaagagaagtgttagaagatgcattggaggattattcgggtacgatt
cttgctgtatcccatgaccgttacttcctaaataaactattccagaaaacatactggatt
cgaaatcaaacgttatataactttgttggaaactatgattgggcaaaacgtaaactacaa
gaacaaacacaggagatagaatcagtcccagaattaaaggatatgcccgaaaaggttgtg
aaaccaaagactactaatcaatcttatcaaatgaatgaaattgaaaggcaattagaagag
gttgagaaggtgttatatgatctagatcaatcattgctactagaacaaaatctagaaaag
ctccaaaacttatatgaacaaaaaagtaagttggaaggagcacgggatgaattatatgaa
aagttagagaaactgttggcttaa
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