Litchfieldia suaedae: IM538_02335
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Entry
IM538_02335 CDS
T08143
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
csua
Litchfieldia suaedae
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csua03016
]
IM538_02335 (truA)
Enzymes [BR:
csua01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
IM538_02335 (truA)
Transfer RNA biogenesis [BR:
csua03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IM538_02335 (truA)
Prokaryotic type
IM538_02335 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
HAGH_C
SapB_1
Motif
Other DBs
NCBI-ProteinID:
QOR67034
LinkDB
All DBs
Position
450462..451199
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AA seq
245 aa
AA seq
DB search
MNNYKLTIQYDGGRYKGWQRLGNSDSTIQGKIENVLTELAGEKIEIIGSGRTDAGVHALA
QIANFKMRKNATEDEVMQYLNRYLPNDISVVDVTLIHDRFHARYNAKDKTYLYKIWNEQY
TNPFMRKYSMHVEEKLDIEKMRIASQFFLGEHDFTSYSNAKSKKKSMVREIYSLEISENA
GFIEIKVRGNGFLYNMVRKIVGTLIEVGLGEIDATAIPGILESKERIQTGRMADAEGLYL
EKVGF
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaacaattataaattaacgattcagtatgatggtggccgttacaagggttggcaacga
ctcggtaatagtgacagtactattcaagggaaaattgaaaatgtattaacagagttggca
ggagaaaagattgaaatcattggatctggaagaacagatgcaggtgtacatgctcttgct
caaatcgctaattttaagatgcgtaaaaatgcaacggaagatgaagttatgcaatattta
aacagatatcttcctaatgatattagcgttgttgatgttacgttaattcatgatcgtttt
catgcgcgctataatgctaaagataaaacatacttgtataagatttggaacgagcaatat
acaaatcccttcatgcgaaagtacagtatgcatgtggaggaaaagcttgatatcgaaaaa
atgagaatagcttctcaattttttctaggtgagcatgactttacttcttattccaatgca
aagtcgaagaaaaagtccatggtgcgtgaaatttactcactagagataagcgaaaatgca
ggctttatcgaaatcaaagtacgaggtaatggtttcctttacaatatggtgaggaaaatt
gttggaaccttaattgaagttggattaggcgaaatagatgctactgcaatacctggtatc
cttgaatcaaaagaaagaattcaaacaggtcgtatggcggatgcggaggggttgtatttg
gagaaggttggtttttaa
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