Litchfieldia suaedae: IM538_06000
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Entry
IM538_06000 CDS
T08143
Symbol
sigI
Name
(GenBank) RNA polymerase sigma factor SigI
KO
K03093
RNA polymerase sigma-I factor
Organism
csua
Litchfieldia suaedae
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csua03021
]
IM538_06000 (sigI)
Transcription machinery [BR:
csua03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IM538_06000 (sigI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Mga
HTH_11
DREPP
HTH_52
Motif
Other DBs
NCBI-ProteinID:
QOR67685
LinkDB
All DBs
Position
1141874..1142617
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AA seq
247 aa
AA seq
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MLSLLFNIGKKRNSLEDEVLLIQEGNSRLQNKLIKKYKPFIAKTVSSVCKRYIDETDDEF
SIGLIAFNEAIEKYSVDKGSSLLSFAELLIKRRVIDYIRKEARVKTVTLVAANDNGEENV
QSKIESDLSIDDYEKKVQQEHRREEIIHFQKVLVEFGLTFSELVENSPKHVDARQNAMLV
AKTLVEEEGLIQILFDKKQLPIKQLEAKVDVSRKTIERNRKYIIAMAIIMAGDYLYLKDY
IKGVLEA
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgcttagtttactttttaatattggtaagaaaagaaactcattagaagatgaagttctt
cttatccaagaaggaaattcccgattacaaaacaaacttattaaaaaatacaaaccattt
attgcgaagactgtatcgtctgtttgcaaaagatatatagatgaaacagatgatgaattt
agcattggtctcatcgcatttaatgaagctatcgaaaagtactctgtagataagggaagt
tcattattatcatttgctgaattactaattaagcgtagagttattgattatatacgaaaa
gaagctcgagtaaagacagttacactcgttgcagctaatgataatggtgaagagaatgtt
caatcaaaaatagaatctgatctttctattgatgactatgaaaaaaaggtacaacaggaa
cacagaagagaagaaatcatccattttcaaaaggtgctagttgaattcggattaacgttt
tcggagctggtagaaaattcaccgaaacatgtggatgctaggcaaaatgcgatgcttgtt
gcgaaaacattggtagaagaagaaggtcttattcagatattatttgataaaaaacagtta
ccaattaagcaattagaggcaaaagtggatgttagtagaaagacaatagagagaaatcgt
aaatatataattgcaatggccataattatggcgggggattacttgtatttaaaagattat
ataaagggggtgctcgaggcatga
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