Litchfieldia suaedae: IM538_07020
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Entry
IM538_07020 CDS
T08143
Name
(GenBank) short-chain fatty acid transporter
KO
K02106
short-chain fatty acids transporter
Organism
csua
Litchfieldia suaedae
Pathway
csua02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IM538_07020
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SCFA_trans
DcuC
DUF5305
Motif
Other DBs
NCBI-ProteinID:
QOR67878
LinkDB
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Position
complement(1340323..1341648)
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AA seq
441 aa
AA seq
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MKATIGFFNRLMQRYLPDPFLFVVILSFLVLILGLIFTDSTVMNMVQYWGDGFWSLLAFS
MQMVLVLVTGYVLASSPVFKKGLGALASTAKTPGQAIIIVTIISIIASWINWGFGLVIGA
LFAKELAKKVENVDYRLLIASAYSGFIVWHGGFSGSIPLTIATEGHFSQDLIGLIPTSET
IFATFNVAIVIALFIVLPILNRMMMPSKEETVTVDKSLLDDGANLQADTVEKEAPTPADR
LENSVIVSIVTGLLGIAFLVYYFTNNGFALNLNIVNFLFLFLGILFHGTPRRFLESVMNA
VKGASGIIIQFPFYAGIMGMMTASGLAAVMSEAFVGISNGFTFYFFAFLSAGIVNFFVPS
GGGQWAVQAPIMLEAAQTMDLSIAKTAMAVAWGDAWTNLIQPFWALPALAIAGLKAKDIM
GFCTIVLFISGIVISLGLLFL
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaacgattggtttttttaacaggttgatgcaacgttatttaccagatccattt
ttattcgttgttatcctgagtttcctcgtacttattttaggactgatttttacagacagc
actgttatgaatatggtgcagtactggggagatggtttttggagcttattagcattttca
atgcaaatggtgctcgtattggtaacaggttatgttcttgcaagtagtcccgtatttaag
aaaggtttaggtgccttagcaagcaccgctaaaacacctggtcaagctattattattgtt
actattatttctattatcgcaagttggattaactggggctttggtcttgttattggggca
ctatttgcaaaagaattagctaagaaggttgaaaatgtagattatcgcctccttatcgca
agtgcttacagtggatttattgtttggcatggtggtttttcaggctcaatcccgttgacc
atagcaactgaaggtcatttctcgcaagatttaatcggattaatcccgacaagcgaaacc
atttttgcaacatttaatgttgccatcgttattgctctatttatcgtccttccgattctt
aatcgtatgatgatgcctagtaaagaggaaactgttacagtagataaatcattactagat
gatggggcaaatcttcaagcagacactgttgaaaaagaagcacctactcctgcagatcgt
ctggaaaacagtgtgattgtctcaatcgtaacagggttactaggaattgcattcttagtt
tattactttacaaataacggttttgcattaaatctaaacattgttaacttcttattctta
ttcctaggtattctgttccacggcactcctagaagattcctagagtctgtcatgaatgcc
gttaaaggtgcaagtggaattatcattcagttcccgttctacgctggtattatgggaatg
atgactgcttcaggattagcagccgtaatgtctgaggctttcgttggaatatccaatggt
tttaccttctatttctttgcatttcttagtgcgggtatcgttaacttctttgttccttca
ggtggaggacaatgggctgttcaagcacctatcatgcttgaagctgcacaaacaatggac
ctttccatcgccaaaacagccatggcagtagcgtggggcgatgcgtggacgaatttaatc
caaccgttctgggcattacctgcacttgccattgctggactaaaagcaaaagatatcatg
ggcttctgtacaatcgtactattcataagtggtatcgtcatctctttaggtttattattc
ttatag
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