Litchfieldia suaedae: IM538_11060
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Entry
IM538_11060 CDS
T08143
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
csua
Litchfieldia suaedae
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csua03016
]
IM538_11060 (truB)
Enzymes [BR:
csua01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
IM538_11060 (truB)
Transfer RNA biogenesis [BR:
csua03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IM538_11060 (truB)
Prokaryotic type
IM538_11060 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QOR68600
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All DBs
Position
2087359..2088300
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AA seq
313 aa
AA seq
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MDGILLLNKPKGMTSHDCVFKVRKLLRIKKVGHTGTLDPDVTGVLPICIGRATKVVEYIT
GADKTYEGEVTIGFSTTTEDASGEVVARKTVTEAFTKEKIEATLRSLTGKITQTPPMYSA
VKVNGKRLYEYARQGIEVERPSREITISELVLLDERQLFEGNDGTISFRFRVTGSKGTYV
RTLAVTIGEKLGYPAHMSDLVRTASGQFHLENCLTFSEIEELIQMGDINKALYPIETALS
HLPNLKINDKVAGKVQNGAVLAIPEELSSLESGEPFTILNEAGETIAIYEKHPSKPNVMK
PVKVLVNAQELKA
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggatggtatacttttattaaataagcctaaagggatgacatcccatgattgtgttttt
aaagtaaggaagttattgagaattaaaaaggtgggacatactggtacacttgatccggat
gttactggagttttaccaatttgtataggtagggcaacaaaggtggttgagtacattact
ggtgcggataagacatatgagggagaggtcacaattggcttttcaaccactaccgaggat
gcatcaggtgaagtagttgctcgaaaaacagtgactgaagcttttaccaaggaaaaaata
gaagcaactctccgctcattaacagggaagattacgcaaacaccccccatgtactcagct
gttaaagtgaatggtaaaaggctatatgagtacgcaagacaagggattgaggttgagaga
ccttcaagagaaattactatctcagaacttgttttattagacgagcgccagctatttgaa
ggtaatgatgggacgatctcattccgctttcgtgtcacaggtagtaagggaacttatgtt
agaactcttgcggtaacaataggagaaaaattaggatatcctgcgcatatgtcagactta
gttcgaactgcatcaggacaattccatcttgaaaactgtttaacattttcagaaattgaa
gagttaattcaaatgggggacattaataaagctctgtatcctatcgaaactgcactttct
catttgccgaatctaaaaattaatgataaagtagcaggtaaagtacaaaatggggcagta
cttgccattccggaggagctttcgtcattagaaagtggagaaccattcacaatattgaat
gaagctggggaaacgattgcaatttatgaaaaacatcctagcaaacccaatgtaatgaag
ccggtcaaggtattagtaaatgctcaagaactaaaagcatag
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