Litchfieldia suaedae: IM538_11245
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Entry
IM538_11245 CDS
T08143
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
csua
Litchfieldia suaedae
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csua03016
]
IM538_11245 (miaB)
Enzymes [BR:
csua01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
IM538_11245 (miaB)
Transfer RNA biogenesis [BR:
csua03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
IM538_11245 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
QOR68636
LinkDB
All DBs
Position
2128118..2129650
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AA seq
510 aa
AA seq
DB search
MNEKQRLETSAQINPADKKSVKDYSQYFQSVYQPPSLQDAKKRGKEEIKIDRGFIIPEDM
LNLGVGRKFYIRTYGCQMNEHDTEVMAGILTEMGYEPTDSVETADIVLLNTCAIRENAEN
KVFGEIGHLKTYKKRNPNLLIGICGCMSQEESVVNRILQKHQFVDMVFGTHNIHRLPQIV
KEAMFSKEMVVEVWSKEGDVIENLPRVRKGEIKAWVNIMYGCDKFCTYCIVPYTRGKERS
RLPQDIIEEVRHLARNGYQEVTLLGQNVNAYGKDFADMTYGLGELMDELRKIDIPRIRFT
TSHPRDFDDRLINVLAKGGNLMEHIHLPVQSGSSEVLKLMARKYDRETYLDLVRKMKERI
PNASFTTDIIVGFPNETDEQFEETMSLYREVEFDTAYTFIYSPREGTPAAKMEDNIPMEV
KKERLQRLNALVNELAVQKNLALQDQIVEVLVEGESKKNPDILAGYTSKNKIVNFKGPKS
TIGKIVKVKITQAKTWSLDGEMIEEAVEVN
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaaacaaagattagaaactagtgctcaaataaatccagcggacaaaaaatcc
gtgaaggattatagccaatacttccaatctgtttatcaaccaccttctttacaagatgct
aagaaacgtggaaaagaagaaattaagattgatcgtggtttcatcattcctgaagatatg
ctcaatctaggggtaggacgaaagttttatatacgaacttacggatgtcaaatgaatgaa
cacgataccgaggttatggctggtatattaacagagatgggatatgagcctacagattca
gtcgaaaccgctgatattgtcttgttgaatacttgtgcgattagggaaaatgcggaaaac
aaggtttttggtgaaattggacacctaaaaacttataaaaaacgcaatcctaatctatta
attggtatttgtggatgtatgtcacaggaagaatcagtggtaaatagaattcttcaaaaa
catcaatttgttgatatggtctttggtacacataatattcaccgtttacctcaaattgta
aaagaagcaatgtttagtaaggaaatggttgttgaagtgtggtcaaaagaaggggacgta
atcgaaaaccttcctagggttcgaaaaggagaaataaaggcttgggttaacattatgtat
ggatgcgataagttctgtacgtattgtattgtaccttacactcgtggtaaggaacgtagt
cgattacctcaagatattattgaggaagtacgtcatcttgctcgaaacggttatcaagag
gtaactcttttaggtcaaaatgttaatgcctatggaaaagacttcgctgatatgacttac
ggactaggtgaattaatggacgagcttcgcaaaattgatatacctcgtatacgatttacg
acaagtcatccacgtgattttgatgaccgcttaattaatgtgttagccaagggtggaaat
ctgatggagcatattcacttaccggtacaatcaggaagctctgaggttcttaaattaatg
gcccgtaagtacgatcgtgaaacctatttagatcttgttcgtaaaatgaaggaaagaatt
ccgaatgcttcatttacaacagatattattgttggttttccaaatgaaacagacgagcaa
ttcgaagaaactatgtccttatatcgtgaagtagagtttgatacagcctatacatttatt
tactctcctcgcgagggtacacctgcagcaaaaatggaagataatattccaatggaagtg
aagaaagaacgtttacaacgtttaaacgctcttgttaatgaacttgcagtacaaaagaat
ttagcattacaagatcaaattgttgaggtacttgttgaaggagaaagcaaaaaaaatcct
gatatacttgctggatatacaagtaagaacaagatagtaaacttcaaaggtcctaaatca
acgattgggaaaattgttaaggtaaaaattactcaggctaaaacctggtctttagatgga
gaaatgatagaagaagcggtagaggtgaattaa
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