Litchfieldia suaedae: IM538_11340
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Entry
IM538_11340 CDS
T08143
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
csua
Litchfieldia suaedae
Pathway
csua02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IM538_11340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csua02000
]
IM538_11340
Transporters [BR:
csua02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
IM538_11340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
MobB
RsgA_GTPase
DUF87
AAA_22
NB-ARC
nSTAND3
AAA_18
AAA_21
ATP-synt_ab
LapA
AAA_23
AAA_29
T2SSE
TsaE
Pox_A32
KAP_NTPase
ATPase_2
DO-GTPase2
Integrase_1
NACHT
cobW
Zeta_toxin
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QOR68654
LinkDB
All DBs
Position
2148559..2150307
Genome browser
AA seq
582 aa
AA seq
DB search
MRVFKDLMWFFKQEKKSYLIGISLLCVVALLELVPPFVIGKVVDLIVEGQLTSKVLTNWL
GLLLVVATIVYIVRFFWRIMLFGASVRLARLLREKLYSHFTKMSQSFYQRRRIGDLMAHS
TNDIQAIQQTAGAGVLTLVDSLVTGGFVLIMMAATISWKLTLISLIPMPFMALSTSWYGT
LLHKRFHKAQEAFSSLNDKVQESISGIKVLKTFGYEKDDVDSFRKESADVVKKNMKVAKI
DALFDPTISLIVGFSFFLAISFGSYFVVKDEMTLGQLVSFTTYLGLLIWPMLAFGWLFNI
VERGRASYDRVSSLLNEKVDIIDSEDVLNEQPSGNICYNINEFAFSDDQITLKDIQITLN
RGDTLGIVGKTGSGKTTLLKLLIREFEGYKGEITFGKHPITKYSLESLRSGIGYVPQDHF
LFSATIADNIAFAKPDATYQEIIQAAELASIHEDIAGFTEGYETMVGERGVSLSGGQKQR
ISIARALIVNPEVLILDDSLSAVDAKTEERILSALKQTREGKTTIITSHRLSAIAHSNVI
VVLEEGRIIQKGTHDELMNDQGWYKEMYHRQQLEALVEHGGM
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcgagttttcaaagatttaatgtggttttttaagcaagagaagaaatcgtacttgata
ggaatttctttattgtgtgtggtagctttattagagctagtacctccatttgtcatagga
aaggttgtagatttaattgttgaaggtcagttaacttcgaaagttcttactaactggctt
ggattgttgttggttgtagcaactatcgtttatatcgttcgatttttttggagaattatg
ctatttggagcttcagtaaggttagctagattactcagagagaagttgtatagccacttc
actaagatgtctcaatctttctaccaaaggcgaagaattggtgatctaatggctcattcg
accaatgatattcaagcaattcaacaaactgctggagcaggtgtattgaccttggtcgac
tcgttagttacaggtggatttgtattgattatgatggctgcaacgattagttggaaactt
acactcattagtctaataccaatgccgtttatggcattatctacaagttggtatggtacc
ttattacataagcgttttcataaggctcaggaggctttttcatccttaaatgataaagta
caggaaagtattagtggtatcaaagtattaaaaacttttggatatgaaaaggatgatgtg
gattcttttcgtaaagaatccgcggatgttgtaaaaaagaatatgaaagttgctaaaatt
gatgccttattcgatccaacgatttcgttgattgtagggttctctttttttctggcaatt
tcctttggttcttattttgtagtaaaggatgaaatgacgctaggtcaacttgtttcgttt
actacttatttgggattattaatttggccaatgttagcttttggttggttatttaatatt
gttgaacgaggaagagcatcatatgatcgtgtttctagtcttttaaatgagaaggtagat
attatagatagtgaagatgtattgaatgaacaaccttctggcaatatttgctataacatt
aatgaatttgctttttcggatgatcagattaccttaaaggatatacaaataacgttaaat
cggggtgatacattagggattgtaggaaaaacaggttctggaaaaacgacactgcttaaa
ttattaattagagagtttgaaggatataagggagaaattacatttggtaagcatccaatt
acgaagtattccttagaatcattaagaagtggaatagggtatgtgccacaagatcatttc
ttattttctgcaaccattgctgataatatagcttttgctaaaccagatgctacctaccaa
gagataattcaggcagcagaacttgcttcaatccacgaggatatcgctggttttacagaa
ggctacgaaacaatggtaggagaaagaggagtttctctttcgggtggacagaaacagcgt
atatctattgctagagcacttatagtaaatccagaggttttaatactagatgattcatta
tccgctgtagatgcaaagacagaagaaagaatattatctgctttaaaacaaacgagagag
ggtaaaacgactattatcacatctcatcgtttaagtgcaattgcacattcgaatgtaatt
gtagtattagaggaaggcagaattattcaaaaaggcacccatgatgaattaatgaatgat
caagggtggtataaagaaatgtatcaccgtcaacaattagaagcacttgtagaacatgga
ggtatgtga
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