Litchfieldia suaedae: IM538_11410
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Entry
IM538_11410 CDS
T08143
Symbol
selB
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
csua
Litchfieldia suaedae
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
csua03012
]
IM538_11410 (selB)
Translation factors [BR:
csua03012
]
Eukaryotic type
Elongation factors
IM538_11410 (selB)
Prokaryotic type
IM538_11410 (selB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
WHD_3rd_SelB
Beta-barrel_SelB
GTP_EFTU_D2
WHD_2nd_SelB
MMR_HSR1
SRPRB
MnmE_helical
PduV-EutP
GTP_EFTU_D4
FeoB_N
Motif
Other DBs
NCBI-ProteinID:
QOR68667
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Position
2161138..2163024
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AA seq
628 aa
AA seq
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MEKRSFTIGMAGHIDHGKTTLTKSLTNVDTDRLKEEKERQISIELGFAPLHINEEMQISV
IDVPGHERFIRQMIAGVAGIDLVILVVAADEGVMPQTKEHLEILSFLGVKRGIVAISKID
RVEEEFTELVKEEIAEQLHGTIFAEAPMVSINSLSKTGIDELKSTIINQLSRIEARNSFG
SFRLPIDQVFTVKGQGTVVRGTVYEGTVYEGDHLTILPSLLETKARQLQIHQIQMDKATA
GQRVAINLSNVTTDDVTRGDVLVSSKHYVVTQTMDVVIRFVSDLEHLVKQRALVKCHIGT
SEVMGQIVFFDRNEVKEELDEVVCQIRLEQPIVTKRGDRFILRRPTPSETIAGGWVIDPL
GGKYKFGKDTVSMLLQKKEGSPFERLTEALQREKLLSKAEIIKATSIAKESVEELLSKQG
VIEVKANSYTLQTVISQLHSKVEDLLQNYHLGNSLRLGLNKAEISQELSSKYPKILLDFV
IEGMITEGKIKKIGQFLALEQFKPSFPSQWAKRMENLIKSLIEDDLQVKTWDEYVAQAGL
PDKEANELKWFLTNSNLLYQLDEKHVIHKNVVDKAVIELKASTGESFDLKDAKDTLQLSR
KYLVPLLELLDTLNLTKREDNKRIWVEK
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaggtcttttacaattggtatggcaggtcatatagatcatggaaaaacgaca
ttaacaaaatctttaacaaatgtcgatacagaccgtttgaaggaagaaaaggaacgacaa
atttctattgaattggggtttgctcctttacatataaatgaagaaatgcaaatttcggtg
attgatgttccaggtcatgaacgttttattcgtcagatgattgcaggggtagctgggatt
gatttggttattttagttgtggcagcagatgagggtgtgatgccacaaacgaaggagcat
ttagaaatactatcctttttaggtgttaaacgagggatcgttgctattagtaagatagac
cgagtagaagaagaatttactgaattggtgaaagaggaaatagctgagcaattacatgga
acaatatttgcagaagcaccaatggtttcgattaatagtttatcaaaaacgggaatcgat
gaactaaaaagcacaattattaatcaattgtctcggatcgaagctcgtaattcatttgga
agctttcgactcccaattgaccaggtgtttacggtgaaggggcaggggacagtcgtaaga
ggtactgtctacgagggtactgtttatgaaggagatcaccttacaatcttaccgtcctta
cttgagacaaaagccaggcaattgcaaattcaccaaatacaaatggacaaagcaacagct
ggacaaagagtcgccattaatctttcaaatgtcacaacagatgatgtgacgagaggagat
gtgctagtctcttcaaagcattatgtcgttactcaaacaatggatgttgtcatccgattt
gtgtcagatttagagcatcttgttaagcaaagagcgctagtcaaatgtcacattggcact
tcagaagtgatgggtcaaatcgtattttttgaccggaatgaagtgaaggaagagcttgat
gaggtagtctgtcagattcgacttgagcagcctattgttacaaaacgaggggatcgattt
atattaagaaggcctactccatcggaaacgattgcaggtggttgggtaattgatccactt
ggtggaaaatataagtttggtaaagacactgtttcaatgctccttcagaaaaaagaagga
agtccatttgaacgtttaacagaggctttacaaagggaaaaactgctttcgaaagcagag
attataaaggcaacttctattgctaaagagtcagtagaggaattactttccaaacaggga
gttatagaggtcaaggcaaatagctatacgttacaaacagttatatctcaattacacagt
aaagtagaagatcttttacaaaactaccatcttgggaactccttgagactaggacttaat
aaagcagaaatttctcaggaactttcaagtaagtatcctaagatattattggattttgtg
attgagggaatgattactgagggcaagataaagaagattgggcaattcttagcactagaa
cagtttaaacctagtttcccatctcagtgggctaagcgtatggaaaatcttattaagtca
ctaatagaagatgatttacaagttaagacctgggatgaatatgttgctcaagcgggtttg
cccgataaagaggccaatgaactcaaatggtttttaacaaattcaaatcttctgtaccaa
ctagatgaaaaacacgttatacataaaaacgtagttgataaagcagtaattgaacttaag
gcctccacaggtgaatctttcgatttaaaggatgctaaagacacattacagctttcaaga
aaatatctagtaccattgttagagttactagatactttgaatcttacaaaaagagaagat
aacaaaaggatatgggttgaaaaatag
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