Litchfieldia suaedae: IM538_11960
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Entry
IM538_11960 CDS
T08143
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
csua
Litchfieldia suaedae
Pathway
csua02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IM538_11960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csua02000
]
IM538_11960
Transporters [BR:
csua02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
IM538_11960
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
EssA
DUF5305
Gram_pos_anchor
TMEM51
DUF2615
Motif
Other DBs
NCBI-ProteinID:
QOR64588
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All DBs
Position
complement(2271095..2272894)
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AA seq
599 aa
AA seq
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MKKSYLGLFLIMILLLSNLSAVSAAGTVESLKVGITKSENGLNPYTYVTGYPGLDLVNLL
YDNLFQLDENNIPQPWLVTQHTVSPDGLSYELTLHDNVKWHDGKPLTANDVKFTMEYFIK
YPKSRFTNPLKSISSIEVLNDTTIKLVLSQANPNFMIQPLADLPILPEHIWSSISAPDDE
TNALGSGPYILEEHKAGQYYKMKANPDYFKSASPIKELIFPIIEDTTAMLNALQAGEIDA
ISSSISPELVEQFDSNPSLKVVRGPGYSTSLFQINAERYPMTESAFRQAIDYAIDKKYIV
DTVLLGFAEIGSPGFIHPSSPFYNSDLKTVFNQEKSKELLETAGFKDIDGDGFREGQQGE
NIDLTTLVYSGNPIRIRTAELISEALNNVGIKNTVKAMDSTTVDSLMWPDFDVSKGRDFD
LGLWGWSNTMQLFPDRMIELFYSDPSIGSVNIGGYKNTEFDKLAEKLKETFDEAERTGII
KDMQVLVAEDAPFVTLYYQEIVNAFNPEKYDQFVFQVGKGIINKLSFVSGEKSELPEQDK
QEEETETESKTEKESEDLTVDSNNTVLYVFGVVVVLGVIVFFLRNKKKRKTEKDDEFDF
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtcatatttgggtttatttcttataatgattctattactttcaaatctctca
gctgttagtgcagcaggaactgttgaatcccttaaggtggggataacaaaatctgaaaat
ggtttaaatccatacacgtatgtaacggggtatccgggattagatttagttaatttactt
tatgataatctattccaactagatgaaaataatattcctcagccttggctagtaacacaa
catactgttagcccagatggattatcctatgaattaactctccatgataatgtaaaatgg
catgacggaaaacctttaactgcaaatgatgttaaatttacgatggaatattttattaaa
tatcctaagtcacgctttactaatccacttaaatctatttcatccatcgaagtattgaat
gatactacaattaaactagtattatctcaagcaaatccaaatttcatgattcaacctcta
gccgatctaccaatattacctgaacatatatggtcatcgatttcagctccagatgacgaa
acaaatgccctaggtagtggaccatatattttagaagaacataaagcaggtcaatattac
aaaatgaaagccaatcctgattatttcaaaagtgcttcgccaataaaagaattgattttc
ccaatcattgaggatacaactgcaatgcttaatgctcttcaagcaggagaaatcgatgca
atatcttcaagtatatctccagagctagttgaacaatttgattctaatccttctttaaag
gtggtaagagggccagggtatagtactagtctgtttcagattaatgctgagagatatcca
atgacagaatcagcatttcgtcaagcaatcgattatgcaattgataaaaaatatattgtc
gatacagttttgctagggtttgcagagattggaagtccaggctttattcacccctcatcc
ccattctacaatagcgaccttaagacagtttttaatcaagaaaaatctaaagaattatta
gaaactgcgggttttaaagatatagacggagatggatttagagagggtcaacaaggtgaa
aatatcgacttaacaacacttgtgtattcaggtaatccaattcgaattcgtacagctgaa
ttaatatctgaagctttaaacaatgttggtatcaagaatacagtgaaagcaatggattct
acaactgtagactccttaatgtggccagattttgatgtgagtaagggtagagattttgac
cttggcctatggggctggtctaatacaatgcagttgttccctgatcgtatgatcgagcta
ttttattcagacccatcaattggttctgtaaacattggtggctataaaaatactgagttt
gataaacttgcagaaaaattgaaagaaactttcgatgaagctgaaagaactggcatcatt
aaagacatgcaagttctagttgcggaggatgcaccgtttgtaacactctattaccaagaa
attgtaaatgcattcaatcctgaaaaatatgatcaattcgtgtttcaggttggaaaaggt
ataattaacaaattgtcctttgtgtctggtgaaaaatcagagttgccagaacaagataag
caagaagaagaaactgaaacagaatctaaaacggaaaaagaatcagaagatttaactgta
gattctaataatactgttttatatgtattcggagtggttgttgtattaggtgtaattgta
ttctttctgagaaataagaagaaaaggaaaactgaaaaagacgacgaatttgatttttaa
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