Litchfieldia suaedae: IM538_12430
Help
Entry
IM538_12430 CDS
T08143
Name
(GenBank) response regulator transcription factor
KO
K07693
two-component system, NarL family, response regulator DesR
Organism
csua
Litchfieldia suaedae
Pathway
csua02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IM538_12430
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
csua02022
]
IM538_12430
Two-component system [BR:
csua02022
]
NarL family
DesK-DesR (membrane lipid fluidity regulation)
IM538_12430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
Sigma70_r4
HTH_23
HTH_40
HTH_29
HTH_11
DUF6115
HTH_68
HTH_28
HrcA_DNA-bdg
HTH_Tnp_ISL3
TnsD
HTH_17
UPF0122
DUF1922
Motif
Other DBs
NCBI-ProteinID:
QOR64674
LinkDB
All DBs
Position
complement(2366380..2366979)
Genome browser
AA seq
199 aa
AA seq
DB search
MIRIVIAEDQRMMLGALGSLLNLEDDMEVVGKASNGQEAIDLVRKLQPDVCIMDIEMPEK
TGLEAAEELKGFDCKLIILTTFARTGYFQRALKAGVSGYLLKDSPSEELASSIRFCLAGK
RIYAPELMDDVYSEENPLTEREKEVLELVADGKNTQEIAEELRIKTGTVRNYISAILEKL
EVKNRIEAITQSKEKGWFK
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgataaggattgtcatagctgaagatcagcgaatgatgttaggagctttagggtcttta
cttaacttagaagatgatatggaagtcgtcggaaaggcaagtaatggtcaagaggctatc
gatctcgttcgtaaacttcaaccagatgtatgcatcatggatattgaaatgcctgaaaaa
actggtcttgaggctgcagaagagttaaaaggatttgattgtaagctgattatattaaca
acctttgcgcgtacgggttattttcaacgtgcattaaaagcaggagtaagtggctatcta
ctaaaggatagtccgagtgaggaattagcaagctcgattcgcttttgtcttgcaggtaag
agaatttatgctccagaactgatggatgatgtctatagtgaggagaacccactaacagag
cgtgagaaagaagtacttgagttagttgctgatggaaaaaacactcaggaaattgcagag
gaacttagaatcaaaacaggaacggttagaaactatatatctgctattttagaaaagctg
gaagttaaaaatcggattgaagccattactcaatccaaggaaaaaggctggtttaaatag
DBGET
integrated database retrieval system
