Litchfieldia suaedae: IM538_12685
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Entry
IM538_12685 CDS
T08143
Name
(GenBank) RNA helicase
KO
K17675
ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:
5.6.2.6
]
Organism
csua
Litchfieldia suaedae
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
csua03029
]
IM538_12685
Enzymes [BR:
csua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
IM538_12685
Mitochondrial biogenesis [BR:
csua03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
IM538_12685
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Ortholog
Paralog
GFIT
Motif
Pfam:
DEXQc_Suv3
Helicase_C
DEAD
SLFN-g3_helicase
VpsT-like_REC
HypA
DZR
Motif
Other DBs
NCBI-ProteinID:
QOR64720
LinkDB
All DBs
Position
complement(2412450..2415032)
Genome browser
AA seq
860 aa
AA seq
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MEQINAIHQNAIEHTKRKVLEDLDRFFESRAEMPSFEEYIEERKHYIDQIWLNVWLNKST
NAVSKHLKKAHLEEVGYDVEGLDRRLVIKLFRTEMRKYSPFDVNEWFTKTYKSNETLWEE
SYSKARIQFIKRQKKAEEQEKQEALKERVARASLKLIRQKHEEVYLYLRYFVASKLKSDI
ESKPVYETIDPVKIEETLTEVDVFEIGYNTKVSDFFETLTGSVHKVSLEWERRHYEYETY
FYVYQRLMTKYLSEFIPGWLLSQLSPSILSQYQERFNEALTEKVINYLILEQIYDYIESF
FYRINDEYLADLLTVAELPFDLEMHREKFEQDLAERERKIAEEKAELERKKQEEKRMLED
IFGREYSPPAGRNIRYVLHVGETNTGKTFQALKRMKEADSGLYLAPLRLLALEVYDKLNA
DGVPCSLKTGEEEKLTRGANHISSTVEMFHEKESYDIVVIDEAQMISDKDRGFSWYKAIT
KANANEVHIIGSRNMKQMILQLLGDSDIEINEYEREIPLEVEQKTFNIKDTKKGDALVCF
SRKRVLEIASVLQNNKRSVSMIYGSMPPETRKKQMQRFINGETNVIVSTDAIGMGLNLPI
RRIVFLENEKFDGTRRRRLTSQEVKQIAGRAGRKGIYDVGKVAFTSDIKAMTKLLEKEDI
SISSFAIAPTSSVFERFQRYSRKLGVFFELWEKFESPKGTKKASLAEERELYQMVRDTDI
EARLSVQELYGFLHLPFSPHDPGLADQWKDTMYAIINREELPEPRIKTGSLEELELSYKA
VGLHLLFLYRLERRTEALYWERVREEISDGVHDSLITEVKKIKKKCKKCNKQLPWDFSFQ
ICNECHADRSQSRYKNYYHR
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggaacagataaatgctattcatcaaaatgccatagagcatacaaagcgaaaagtgctt
gaagatcttgatcgattttttgagtcacgagcggaaatgccttcatttgaagagtatatt
gaagagcgaaaacattatatagaccagatttggcttaatgtttggctaaataaaagtaca
aatgctgtatcaaaacatcttaaaaaagcacaccttgaggaagtagggtatgatgtcgag
ggtttagatagaaggttagttatcaagttatttcgaactgagatgagaaaatatagcccg
tttgatgtaaatgaatggtttacaaaaacctataagtcaaatgaaactctctgggaggaa
tcctattctaaagcgagaatccaatttattaagcgtcaaaagaaagcagaggaacaggaa
aaacaagaagctcttaaagagcgagtagcacgggcatcattaaagctaattcgtcaaaag
catgaggaagtctacctctaccttcgatacttcgttgctagtaagttgaaaagtgatatt
gagagcaagcctgtgtacgagacaatcgacccggtcaaaattgaagaaacgttaacagag
gtcgacgtatttgagattggttataatacaaaagtttccgacttctttgaaacgttaaca
ggaagtgttcataaggtctctcttgaatgggaaagaagacattatgaatatgaaacctat
ttttatgtttatcagagattgatgactaagtatctatctgaatttatacctgggtggttg
ctttctcagctatcaccttcgattttaagtcaataccaggaaaggtttaatgaagctctt
accgaaaaagttattaattatttaatacttgagcaaatatacgattacatcgaatctttc
ttttatcgcatcaatgatgaatatcttgcagatcttcttacggttgcggaattacctttt
gatttagaaatgcatagagagaaatttgagcaagatcttgcagaaagagaaagaaaaatt
gctgaagaaaaagccgaacttgaacggaagaaacaagaagaaaaacgaatgcttgaggac
atctttggaagggaatacagtccaccggctggacgaaatattagatatgtcttacatgtt
ggtgaaacaaatacaggaaagacttttcaggctttaaaacgaatgaaggaagcggatagt
ggattataccttgctcctcttcgtcttcttgccttagaggtatatgataaattaaatgct
gacggtgttccatgttctctaaaaacaggtgaagaagagaaactgactagaggggcaaat
catatctcgagtacggttgaaatgttccatgaaaaggaatcctatgacattgttgtcatt
gatgaagcacagatgatttctgataaggaccgaggtttttcttggtataaggcaattacg
aaagcgaatgcaaatgaggttcatattatcggaagtagaaatatgaaacaaatgatcctg
cagcttttaggtgattcagatattgaaattaatgaatatgaacgggaaattccattagag
gtggaacagaagacctttaacattaaagatacgaaaaaaggagatgcactcgtttgcttt
tcgagaaaacgtgtattagagattgcctctgttctccaaaacaataaacgatcagttagt
atgatctatggcagtatgccgccagaaacacgaaaaaagcagatgcaacgttttataaat
ggtgaaacgaatgtaattgtctcaacagatgctatcggaatgggattaaatttaccgatt
cgcaggattgtgtttttagaaaatgagaagtttgacggtacaagacgaagaagattgact
tcccaggaagtaaagcaaattgcgggtagagcagggagaaaaggaatatacgacgttggg
aaggtcgcttttacttctgatataaaagcgatgacaaagctacttgagaaggaggatatt
tctatctcatcttttgccattgcaccaacatcaagtgtgtttgaacgttttcaacggtat
tcacgaaaactaggtgtgttctttgaactatgggaaaagtttgaaagcccaaaaggaaca
aaaaaggcatctcttgctgaagaacgtgaactataccagatggtcagagatacggatata
gaagcaagactttccgtgcaagaactatatgggtttctacatttacctttttcaccacat
gaccctgggttagcagatcaatggaaagataccatgtatgcaattattaatagagaggaa
ttacctgagcctcgaattaagacaggttcacttgaagaactcgagctttcttataaagct
gtcggattacatcttctgtttttgtatcgcctagaaagacgtacagaggcactttattgg
gaacgagtccgtgaagaaattagtgatggggtgcatgatagcttaattaccgaagtgaaa
aaaataaaaaagaaatgtaagaaatgcaataagcagctgccttgggacttttcattccag
atttgtaatgaatgtcatgcggaccgttcacaatctcgatataagaactattaccataga
tga
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