Litchfieldia suaedae: IM538_12960
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Entry
IM538_12960 CDS
T08143
Name
(GenBank) ABC transporter ATP-binding protein
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
csua
Litchfieldia suaedae
Pathway
csua02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IM538_12960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csua02000
]
IM538_12960
Transporters [BR:
csua02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
IM538_12960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
DUF87
nSTAND1
AAA_5
RsgA_GTPase
AAA_29
AAA_16
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QOR64768
LinkDB
All DBs
Position
complement(2470820..2472562)
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AA seq
580 aa
AA seq
DB search
MLNVLSYLKPYRIAIVIALSLMLTELVVELVQPLLIAKIIDDGILQNDLSVIYKWGAVMV
GLSLLAFASGVINSFFAAHVSQSYGFDLRKHLFLKVQSFSFANFNEFQTSSLITRFTNDV
TQLQNTVFMSLRIMLRAPLLIIGGMIMALFVNVKLALVLVIAVPSLFLFLIYFMNKGSVL
FKAVQERLDQVNRVMRENLSGMRLIKAFLRWKYEVDRFTNANEKLRDKTINSLRVIEFTM
PILLLVMNLSIIAILWFGSVEVNTNQAGVGEIVALVNYATRIMGAFSIFTFIILAFSRAK
ASAGRISDVLVSEADMVDSTDAIEPGKFVRGEIEFKNVSFVYPGTTEEVLHNISFKAKSG
ETVAILGATGSGKSSLFQLIPRLYDADSGMVLIDGYNVKDMKQDQLRKQIGYVPQEALLF
TGSVSDNIRWGKEDASMEEIVEATKSAQIHDTVEKLPNKYDTLIGQRGVNLSGGQKQRLS
IARALIRKPRILLLDDSTSALDLKTEAKLLQALTRYKCTTLIITQKITTAMEADNILLIE
DGSLLEQGNHNELLKNSSLYQKIFVSQFGEEELRRAKGTN
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacgttttatcgtatttaaagccttatcgaattgccatcgttatcgctttatca
cttatgctaacagagttagtggtcgagcttgttcaacctctactgattgcaaagataatt
gatgatggtattttacaaaatgacctctctgtcatctataaatggggagcagttatggta
gggttgtctttattggcttttgcttctggagtaattaactccttttttgccgctcatgtg
agtcaaagctatggatttgaccttagaaaacacctatttctaaaggtacaatccttttca
tttgccaattttaatgaatttcaaacttcttcattgattactagatttacgaatgatgtt
acacagcttcaaaatacagtatttatgagtttacgtattatgttaagagcaccactgctt
attattggtgggatgataatggctttatttgtgaatgtaaagcttgctcttgtattggtt
attgctgtcccttccttatttctcttcctgatttattttatgaacaaaggaagcgtcttg
tttaaagcggttcaagaacgtttagatcaagttaaccgtgtaatgcgcgaaaatctatct
ggaatgcgtcttattaaagcattcttaaggtggaaatatgaagtagaccgatttacgaac
gcaaacgagaaattaagggataagacaattaattccttacgagttattgaatttacgatg
ccaattttactcttggtcatgaacttaagtattatcgctattctctggttcggaagtgtt
gaagtaaatacaaatcaggctggggtaggggaaattgttgctttagtcaattacgctaca
agaattatgggggccttttcaatatttactttcatcattcttgccttttctcgggcaaaa
gcatcagctggccgtatttcagacgttcttgtgtcagaggctgatatggttgattcaacc
gatgctattgaaccaggtaaatttgtaagaggcgaaatcgaatttaagaatgtatctttt
gtatatccaggaacaacagaagaagtattacataacatttcattcaaagcaaagtctggt
gaaacagtagcgatcttaggagcaacaggatcagggaaatcttcattgtttcagttgatt
ccccgattatatgatgcagattcaggtatggttttaattgatgggtataatgtaaaagat
atgaaacaagatcaattaagaaagcaaatcggttatgttcctcaggaggcattattattt
accggtagtgttagtgataatattagatggggaaaagaagatgcttcaatggaggaaatt
gttgaagcaactaagagtgctcaaattcatgacacagtagaaaaattaccaaacaaatat
gatacgttaatcggtcaaagaggagtaaatctttctggtggccaaaaacaacgattatct
attgctagagcattgataagaaaaccaaggatattattattagatgatagtacaagtgct
ttagatttaaagacggaggcaaaattacttcaagctttaactcgatataaatgtacaaca
cttatcattactcaaaaaattacaacggctatggaagctgacaatatcttgcttatagag
gatggttctttattggaacaagggaatcataatgaacttttgaaaaattctagtctttat
cagaaaatctttgtatcacaattcggagaggaggagcttagacgtgccaaaggaacaaac
taa
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