Litchfieldia suaedae: IM538_13660
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Entry
IM538_13660 CDS
T08143
Name
(GenBank) phytoene/squalene synthase family protein
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
csua
Litchfieldia suaedae
Pathway
csua00906
Carotenoid biosynthesis
csua01100
Metabolic pathways
csua01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
IM538_13660
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
csua01006
]
IM538_13660
Enzymes [BR:
csua01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
IM538_13660
Prenyltransferases [BR:
csua01006
]
Terpene biosynthesis
Squalene/phytoene synthase
IM538_13660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
DUF5685
Motif
Other DBs
NCBI-ProteinID:
QOR64894
LinkDB
All DBs
Position
complement(2575284..2576147)
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AA seq
287 aa
AA seq
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MIHSNLILECEKMMKKGSASFYEAFRFLPSPRKEAVFVIYAFCRLIDDSIDEPENSPFTI
EELEDKFKHIEKAEGHFIWPSLRWLFDNFPVGKEPFLKQISGQRMDLSLTHYQSMKQLEV
YCEKVAGSVGEMLLPVLHDSPTLDVQKAGIQLGKAMQIVNIIRDVGEDLNRGRRYIPDEW
MAKYQYTHTEFEEMTVNFRFKKMINGLMDLAWSWFEKGLADIESYSTESAFSIKLASNYY
AAIMEAVKINEYQVYTKRAIVSDKKKKAIYITTLQSALEGDVQSIEA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgattcattctaacttgatactagagtgtgaaaagatgatgaagaaaggctctgctagt
ttttacgaggcatttcgttttcttccttccccaagaaaagaagcagtgtttgtcatttac
gcattttgtaggttaatagatgattctattgacgagcctgaaaattcaccttttacaatt
gaagaactagaagataaatttaaacatattgagaaagcagagggacactttatttggcct
tctttaaggtggttgtttgacaactttcctgttggtaaagagccatttttaaagcaaatt
tcgggtcaacgaatggacttatcgttaacacactatcaatcaatgaagcaattagaggtt
tattgtgaaaaagtagccggctctgttggagaaatgcttctacccgttcttcatgattcg
ccgaccctagatgtgcaaaaggcagggattcagctcgggaaagcaatgcagattgtaaac
attattagggatgtcggagaggatttaaacagaggccgccgatatattccggatgaatgg
atggctaaatatcaatatacccacactgaatttgaagagatgacggtcaattttaggttt
aagaaaatgatcaatggactgatggaccttgcgtggagttggtttgaaaaaggattggca
gacattgaatcctactcaactgaaagtgcgttttcaattaaactggcatccaactattat
gctgccattatggaagctgtcaaaattaatgaatatcaagtttatacaaaacgagccatc
gtgagtgataaaaagaaaaaagcaatctacataacgacgctacaaagtgctttagagggt
gacgtccaatcaattgaagcttaa
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