Litchfieldia suaedae: IM538_14845
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Entry
IM538_14845 CDS
T08143
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K06714
arginine utilization regulatory protein
Organism
csua
Litchfieldia suaedae
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csua03000
]
IM538_14845
Transcription factors [BR:
csua03000
]
Prokaryotic type
Helix-turn-helix
Other families
IM538_14845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
PAS
AAA_2
PAS_4
HTH_30
AAA
MCM
AAA_16
sCache_3_2
AAA_3
AAA_7
HTH_20
Motif
Other DBs
NCBI-ProteinID:
QOR65107
LinkDB
All DBs
Position
complement(2786528..2787934)
Genome browser
AA seq
468 aa
AA seq
DB search
MFLQQVGSDEMVKAILSSIDEAIHAVDNTGVTIFYNEVAAKHDGVAIEEVLGKHILTVFP
SLTSETSTLLKVIETKEPIYHLPQTYKNVRGEIIDTVNTTLPIMVNDRLIGAVEIGRDYS
QIKALSNRLIDLQTKLKKKKQKPQEVNGARYTINDILTSCDSFKFVKGQALKVAKTSSTV
LVYGETGTGKELLVQSIHNSSIRKSEPFIAQSCASIPESLLESLLFGTVKGSYTGAVDRA
GLFELAHGGTLFLDEINSMPLEIQAKLLRVLEDGVVRRVGSTKEFKVDVRVIVAMNEEPI
HCLQQNWLRPDLFYRLNVFSLHIPPLRDRVQDIVLLVNHFINQYNQLFVKEVKGINEDTC
KVLTEYVWPGNVRELKHTIEHAMNMAEGDTITIEDLPFHLTGQYNMRKEEQEVSLGDKSL
RELLSTYEVSIINQALAKTDGNIKQAADLLKIPRQTLQYKMSKLETAK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
ttgttccttcaacaggttgggtcagatgaaatggtaaaagcaattctttcaagtatagat
gaagcaattcatgctgtggataacactggagttaccatcttttataatgaagtggcagca
aagcatgatggtgttgcaatcgaagaggttcttggaaagcatattttaactgtatttcct
tccctaactagtgaaactagtacactcttaaaagtaattgaaacaaaggagccgatttat
catctaccccaaacctataagaatgttcgtggagaaataattgatacagtaaatacaacg
ttaccgataatggtgaacgatcgtttaataggtgcagtagagattggtcgagattattca
cagataaaggcactatccaatagattaattgatttacaaacaaaacttaaaaagaaaaaa
caaaaaccgcaagaagtgaatggggcaaggtatacaattaacgatatcttaacctcatgt
gactcgtttaaattcgttaagggtcaagcacttaaggttgcaaaaacatcgtcaactgtc
cttgtttatggagaaacagggactggaaaagagctgcttgttcaatctattcataatagc
tcaattcgaaaatctgagccgttcattgctcaaagttgtgcttcaattccagaatcttta
ttagaaagtttattatttggaacggtaaaaggaagttatacaggggctgttgaccgagct
ggtttattcgaactagctcatggaggaacgttgtttttagatgaaataaattcaatgcca
ttggaaattcaagcaaagctattaagagtattagaggatggtgttgtccgaagggttgga
agcacgaaagaatttaaagtagatgtgagagttatagttgctatgaatgaggaacctatt
cactgcttacagcaaaattggttgcgtccagacttattttatcggttaaatgtattttca
ctccatatccctccacttcgtgatagagttcaagatattgtgttgttagtgaatcatttc
atcaatcagtataatcaactttttgtaaaagaagtgaaaggaatcaatgaagacacatgt
aaagtattaaccgagtatgtgtggcctggcaatgttcgtgagttgaaacacaccattgag
catgcaatgaatatggccgagggtgataccattacaatagaagatctgccttttcattta
acagggcaatataatatgaggaaagaagaacaggaagttagtttgggagataaatcatta
cgcgaattacttagcacgtatgaggtatcgattattaatcaggctctagctaaaacggac
ggaaacattaaacaagctgccgatctattaaaaataccgagacaaacattgcaatataaa
atgagtaaactggaaactgccaaatag
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