Litchfieldia suaedae: IM538_15410
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Entry
IM538_15410 CDS
T08143
Name
(GenBank) DEAD/DEAH box helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
csua
Litchfieldia suaedae
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
IM538_15410
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
WHD_HRQ1
ResIII
SUV3_C
Motif
Other DBs
NCBI-ProteinID:
QOR65206
LinkDB
All DBs
Position
complement(2887071..2889344)
Genome browser
AA seq
757 aa
AA seq
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MKVRKNIQEVIDVIKQTPQFQENLIHWHTIEPKPADTVELPETIDAKLKAALHKRGISAL
YTHQESAFRTAKEQKSFVAVTPTASGKTLCYNLPVLQNILENSQSRALYLFPTKALAQDQ
KSELNEIIEEMDASINSYTYDGDTAANIRQVVRKAGHIVITNPDMLHSAILPHHTKWVSL
FENLKYVVIDELHIYRGVFGSHVANVIRRLKRICEFYGSKPVFMCTSATIANPKELAEQL
TGEEMTLINNNGAPTGKKHFVFYNPPIVNKPLNIRRSATLEVRNLASEFLKNKIQTIVFA
RSRVRVEIILTYLQELVKNQLGAKSIRGYRGGYLPKQRREIEKGLRNGDIYGVVSTNALE
LGVDIGQLQVCIMTGYPGTIASAWQQAGRAGRRQGEAIIIMVASSSPLDQYIIQHPDYFF
SSNPETARINPNNLVILVDHLKCAAYELPFKEGDTFGGTQLEELLEFLTEERVLHQNGDK
WYWMNDSFPAHNISLRSASQENVIIIDQSNVAAVKVIGEMDRFSAMTLLHDEAIYLHQGV
QYQVEMLDWEEKKAFVREVDVDYFTDANLAVQLRVLEIDKHRTQDQLEIGFGDVSVQAMA
TIFKKIKFETHENIGSGPIHLPEEELHTSAAWISLNKEDVKHLSEQRLEEGLIGIANVLR
HVAPLLVMCDPSDLHVVPQVKALHNEQPTIFLYDRYPGGVGLSDKVFEIMESILEEAENM
ISYCSCEEGCPSCIGTDVVNEHVKVDTLKLIDRLRNK
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttcggaaaaatattcaagaggtaattgatgttataaaacaaacaccacagttc
caagagaatcttattcattggcatacgattgagccaaaacccgccgatactgtagaatta
cctgaaacaattgacgctaagctcaaagcagctttacataaaagaggaataagcgcccta
tatacgcatcaggagagtgcatttaggacagcaaaagaacaaaagagcttcgttgctgta
acacctacggcatcggggaaaacactttgctataatttgcctgtattacaaaatatattg
gaaaatagccaaagtagagcactatatttgttccctacaaaagcactcgcacaagaccaa
aaaagtgagcttaatgaaatcatagaagagatggacgcatctattaatagttatacctat
gacggagacaccgcagcaaatatcaggcaggtagtaagaaaagcgggacatattgttatt
accaatccagatatgctgcattcagcgattttaccacatcatactaaatgggtttcttta
tttgaaaatcttaaatatgtggtgattgatgaacttcatatttatcgaggagtctttgga
agtcatgtagccaatgttattcgaaggttaaaaagaatttgcgaattctatggaagcaag
cctgtttttatgtgtacttctgcgaccattgctaatcctaaagaacttgcagaacaatta
actggagaagagatgacacttattaataataatggtgcgcctactggcaagaagcacttt
gtattttataatccaccaattgtgaataagccacttaacattagacgtagtgctacactt
gaagtgagaaaccttgctagtgagtttttaaagaataaaattcagacaattgtttttgca
cgaagtagagtaagagttgagattatccttacgtatctacaagagcttgtgaaaaatcaa
cttggggcaaagtcaatacgaggatatagaggtggatatttacctaaacaaaggcgtgaa
attgagaagggcttgcggaatggagacatttatggggttgtaagtacaaatgctcttgaa
ttaggagtagacataggtcaattacaggtgtgcattatgactggttatcctggaaccata
gcaagtgcttggcagcaagcgggaagagcagggagaagacaaggagaagctattattata
atggttgctagttcaagtccgttagaccaatatatcatccaacatccggactacttcttt
agtagcaatccagaaactgcccgaattaatccaaataatttagtcattcttgtcgatcac
cttaaatgtgctgcttatgaactaccttttaaagaaggggatacatttggcggtactcag
ttagaagaactattagaatttctaacagaagaaagagtgcttcatcaaaatggggacaag
tggtattggatgaatgattctttcccggcacataatatcagcttgcgttctgcttcacaa
gaaaatgtgattattattgatcaatcaaatgtagcagccgtaaaagtaattggagaaatg
gatcgatttagtgcaatgacactcttacatgatgaggctatttacttacatcaaggagtc
caatatcaagtggagatgctagattgggaggagaaaaaagccttcgttcgagaagtggac
gttgactattttacggatgctaatttagctgttcagttacgagtgttagaaattgataaa
catcgtactcaagaccaacttgaaatcggatttggagatgtaagcgtacaggcaatggcc
actatttttaagaaaattaagtttgaaactcatgaaaatatcggttcaggtccaattcat
cttccagaagaggaactccacacctctgctgcttggataagtctaaacaaagaagacgtt
aaacatctcagtgagcaaagactagaggagggtctaataggaattgcaaatgtacttcgt
catgttgctcccttactagttatgtgtgatccatcagacttgcatgttgttcctcaagta
aaagctttacacaacgagcaaccgacaatatttttgtacgaccgatacccaggtggtgtt
ggtttaagtgataaagtgtttgaaataatggaatctatccttgaagaagcagagaatatg
atttcttattgttcctgtgaagagggttgcccttcttgtattggaaccgatgtagttaat
gaacatgtaaaagtagatactcttaagctgatcgatcggcttagaaacaaataa
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