Litchfieldia suaedae: IM538_15820
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Entry
IM538_15820 CDS
T08143
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
csua
Litchfieldia suaedae
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csua03009
]
IM538_15820 (der)
Ribosome biogenesis [BR:
csua03009
]
Prokaryotic type
GTPases
IM538_15820 (der)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
KH_dom-like
FeoB_N
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
Roc
ABC_tran
Ras
DUF5906
AAA
cobW
Nuc_deoxyri_tr2
NTPase_1
Guanylate_kin
NB-ARC
PNK3P
Tsr1_G-like
Motif
Other DBs
NCBI-ProteinID:
QOR65281
LinkDB
All DBs
Position
complement(2961833..2963143)
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AA seq
436 aa
AA seq
DB search
MPKPVVAIVGRPNVGKSTIFNRIVGERISIVEDIPGVTRDRIYSSAEWLSKEFNIIDTGG
IEIGDAPFLAQIRHQAEIAIDEADVIVFIANGREGVTSADEEVAKILYRSEKPVVLGINK
VDNPEMRDQIYDFYALGFGEPYPISGSHGLGLGDLLDAVIANFPTNQPEEYDDEIIKFSL
IGRPNVGKSSLVNALLGEERVIVSDIAGTTRDAIDTKYKFDGREYVIIDTAGMRKKGKVY
ETTEKYSVLRALRAIERSDVVLVVLNAEEGIIEQDKKIAGYAHEAGRAVVIVVNKWDAIE
KDEKTMKEFEEKIKAHFLFLDYAPVVFLSALTKKRTHTLIPMIDLASENHAMRVPTNVLN
DVIMDAVAMNPAPADKGVRLKIYYVTQVAVKPPTFVVFVNEPELMHFSYERFLENRLREA
FGFEGTPIKLIARARK
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaacctgttgttgcgattgttggaaggccaaatgtgggtaaatcaacgatattt
aataggattgttggagaaagaatttcaattgtagaagatatacccggggtaacgagagat
agaatctatagttcagctgaatggttaagtaaagagtttaacattattgatacaggcgga
attgagatcggagatgcgccatttcttgcccaaattagacatcaggcagaaatcgccatt
gatgaagctgatgttatcgtatttattgctaatgggcgtgaaggtgtaacaagtgcagat
gaagaagtggcaaaaattctttatcgctctgagaaacctgttgttctaggtataaataaa
gtggacaatcctgaaatgagagatcaaatctatgatttctatgcccttggatttggtgaa
ccatacccaatttctggctctcacggtttagggcttggagatttattggatgctgtaata
gcaaactttcctacaaatcaaccagaagaatatgatgatgaaatcataaaatttagcttg
attgggcgccctaatgttggaaaatcctcattagtcaatgctttgcttggtgaggaacgg
gtaattgtaagtgatattgccggtacaacccgtgatgccattgatacgaaatataaattc
gatggccgagaatatgtcattattgatacagctggaatgagaaaaaaaggaaaagtgtat
gaaacaacagaaaaatacagtgtattaagagccttgagggcgattgagcgctctgatgtc
gttttggttgttctgaatgcagaagaaggaattattgaacaagacaagaaaattgctgga
tatgcacatgaagcaggcagagcggttgttattgtggtaaataaatgggatgcaattgag
aaagatgaaaaaacaatgaaggaatttgaagaaaaaataaaagcgcatttcttattctta
gattatgctccggttgttttcttatctgccttaaccaaaaaacgtacacatacattaatc
ccgatgattgacttagcgagtgaaaatcatgcaatgcgtgttccaacgaatgttcttaat
gatgtaatcatggatgctgttgctatgaatcctgcacctgctgataagggagttagatta
aaaatctactatgttacacaagttgctgttaagccaccaacattcgtggtgtttgttaac
gaaccagaacttatgcatttttcttacgaaagatttttagaaaacaggctgcgcgaggct
tttggattcgaaggtactccaattaagttgatagcgagagcgcgaaaatag
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