Litchfieldia suaedae: IM538_16010
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Entry
IM538_16010 CDS
T08143
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
csua
Litchfieldia suaedae
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csua03009
]
IM538_16010
Enzymes [BR:
csua01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
IM538_16010
Ribosome biogenesis [BR:
csua03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
IM538_16010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
PAAT-like
DUF348
Bac_chlorC
Motif
Other DBs
NCBI-ProteinID:
QOR65317
LinkDB
All DBs
Position
complement(2997808..2998545)
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AA seq
245 aa
AA seq
DB search
MERLQKVIAHAGVASRRKAEELILDGRVTVNGKVVKELGIKVGPSDKVEVNGVPLDKEEP
VYHLLYKPRGVISSVSDDKGRKVVTDFFPHITQRIYPIGRLDYDTSGLLLVTNDGEFANL
LMHPKHEVDKLYVAKVKGIPSKEKLRLLEKGIQLEDGKTAPAKVKMLSADKKKQTAIVEI
TIHEGRNRQVRRMFDAIGHEVLKLKREKYGFLTLSGLSTGDSRELSPHEVKQLRAMVTTK
GHRLI
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggaaagattacagaaagttattgcccacgcgggcgtagcttcgagacgaaaagcagag
gaattaatccttgatggaagagtaactgtaaatggtaaagttgtgaaagaactaggcatt
aaggtaggacctagtgataaagtagaagtaaatggtgtacctctagacaaagaagagcca
gtataccatctcttatataaaccccgtggagttatatcgagtgtttctgatgataaaggt
agaaaagttgttactgactttttcccccatattacacaaagaatatacccaattggtaga
ttagattatgatacatctggtctcttattggttacaaatgacggtgaatttgcaaaccta
ctaatgcatccaaaacatgaagtggataaactttatgtagcaaaggtaaaaggaattcct
tcaaaggaaaaattacgtttattagaaaagggaattcagttagaggacggaaaaacagcc
cctgcaaaggttaagatgttatctgcagataagaaaaaacaaactgcaattgtagaaata
acgattcatgaaggaagaaacagacaggtacgtagaatgtttgatgcaattggtcatgaa
gtattaaagcttaagcgtgagaaatatggatttttaactttgtccggacttagtacaggt
gattcaagagaactttcacctcatgaagtaaaacaactacgcgcaatggtaacgacaaaa
ggacataggctaatctaa
DBGET
integrated database retrieval system
