Cytobacillus suaedae: IM538_16485
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Entry
IM538_16485 CDS
T08143
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
csua
Cytobacillus suaedae
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PAS
Sigma54_activ_2
PAS_9
PAS_4
HTH_8
PAS_8
AAA
AAA_2
AAA_5
PAS_10
DapB_N
Mg_chelatase
AAA_3
HTH_50
AAA_16
GFO_IDH_MocA
Ldh_1_N
DUF815
Semialdhyde_dh
Shikimate_DH
HTH_30
Motif
Other DBs
NCBI-ProteinID:
QOR65409
LinkDB
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Position
complement(3084113..3086179)
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AA seq
688 aa
AA seq
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MQKVLIVGAGKGGSALLTILHETEMMEVVAMVDINQDAPGIVLAKKLGVLTGQNWRDYIS
SNIDIIVDTTGDEKVFNEIRSKRSKRTVIIPGSVAHITARLMEEKEALITNFKEETYKHD
LIFNSTHDGMIVIDEKGFIILFNRSAERMTELNKVDALGKHIYDVISASKLPRVLHTRET
ELNQEMILENGRKVISTRIPMVNENGLLMGAFAVFKDITEVVNLAEEITNLKEIQTMLEA
IIQSSDEAITVVDEEGRGILINPAYTRITGLEQDEVIGKPANTDISEGESMHMQVLQTRR
PVRGVRMKVGPSKKDVIVNVAPIIVDSKLKGSVGVIHDMSEIQSLTNELNRARQIIRTLE
AKYSFDDIIGASEEMQFAIEQAKLGAKTPATVLLRGESGTGKELFAHAIHNASDRKYNKF
VRVNCAALSESLLESELFGYEEGAFSGAKRGGKRGLFEEAHNGSIFLDEIGELSANTQAK
LLRVLQEHEITRVGGTKTISINVRVIAATNVNLEKGIGKGTFREDLYYRLNRMPIHIPPL
RMRKDEIPALSMHLIHKINQDYGRNVEGLTEDAVNYLKSYNWPGNVRELENVLGRAIIFM
AFHETYIQAKHIQSLQNNEAAEENEKIEISIKEQTLSSLVEDYEGRVITEILHRYDGNKT
KAAKVLGISLRSLYYKLEKYNIANNSMQ
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaagttttgattgtaggtgccggtaaaggtggtagtgctttattaaccatcctt
catgaaacggaaatgatggaagtggtggcaatggttgatattaaccaggatgcaccagga
attgtccttgcaaaaaagcttggtgtcttaacaggtcagaattggcgtgattatatctca
agcaacattgatatcattgtagatacgacaggtgacgaaaaggtatttaatgaaattaga
tcaaaacgaagtaaacgaacagtcattattcctggttcagttgctcatattacagcaagg
ttaatggaagaaaaagaagccctaatcacgaactttaaagaagaaacctataagcatgac
cttatcttcaattcgactcatgatggaatgatcgtaatcgatgaaaaaggttttatcata
ttatttaaccgtagtgccgaaagaatgactgaattaaataaagtggacgcacttgggaaa
catatttatgatgtcatttcagcaagtaaactacctcgagtcttacatacaagggaaacg
gaattgaatcaggaaatgattcttgagaatggacgtaaggtcatttcgaccagaatccct
atggtaaatgaaaatggactactcatgggtgcttttgcagtattcaaggatattacagag
gttgttaatttagcagaagaaataacaaaccttaaagaaattcaaactatgcttgaagca
attattcaatcctcagatgaggcaataacggtcgtcgatgaggaagggcgaggtatatta
attaatccagcctatactagaattactggtttagaacaagatgaagtcattggtaaacct
gcgaacaccgatatttctgaaggtgaaagtatgcatatgcaagtccttcaaacgcgaagg
ccagtccgtggggttagaatgaaggttggtcccagtaaaaaagatgtaattgtaaatgta
gcccctattatagtggacagcaagcttaagggaagcgtcggtgtaatccatgatatgtca
gagattcagtcgcttaccaatgagttaaatagggctagacaaattattagaacacttgaa
gcaaagtactcgtttgatgatataatcggcgcatctgaagaaatgcaatttgcaatagag
caagcaaagctaggagcaaaaacgccagctacagttcttctcaggggagaatcaggtaca
ggcaaagagttatttgctcatgctattcataatgcgagtgatcgaaagtacaacaaattt
gtacgagtgaattgtgctgctttatctgaatcgttattagaaagtgaattgtttggatat
gaggaaggtgcattctcgggagctaaacgtggtgggaagcgtggactctttgaagaggcg
cataatggcagtatttttctagatgaaattggtgaattatctgctaatacacaagcaaaa
ttgcttcgtgttttgcaagaacatgagattacaagggttggtggtactaaaacaatctcg
ataaatgttcgcgtaattgctgctacaaatgtaaatctagaaaaaggaattggaaagggt
actttccgtgaagacttatactataggttaaatcgtatgccaatccacattcctccttta
agaatgagaaaggatgaaattccagccttatctatgcatctaatccataagattaatcag
gactatggtagaaatgttgaagggctaacagaggatgcggtcaactatttaaagtcctac
aattggcctggaaatgtacgagagcttgaaaatgttttaggacgagctattattttcatg
gcatttcacgagacttatatccaagcaaagcacattcagtcacttcaaaacaatgaagca
gcagaagaaaacgaaaagatcgagatctcaataaaagaacaaacattatcgtcattggta
gaagattacgaagggcgagtcattactgaaattttacatagatacgatggcaataaaacg
aaagcggcaaaagtactcggtatctcgctaaggagcttatattataagcttgaaaaatac
aacattgcaaataatagcatgcaataa
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