Litchfieldia suaedae: IM538_16775
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Entry
IM538_16775 CDS
T08143
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K19449
XRE family transcriptional regulator, master regulator for biofilm formation
Organism
csua
Litchfieldia suaedae
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csua03000
]
IM538_16775
Transcription factors [BR:
csua03000
]
Prokaryotic type
Helix-turn-helix
XRE family
IM538_16775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
SinI
HTH_19
HTH_31
HTH_26
HTH_25
HTH_10
Phage_CI_repr
HTH_37
Herp-Cyclin
HTH_IclR
Sigma70_r4
TetR_N
MarR
GH-E
Motif
Other DBs
NCBI-ProteinID:
QOR65452
LinkDB
All DBs
Position
3141274..3141609
Genome browser
AA seq
111 aa
AA seq
DB search
MIGQRIQKYRMQRKMSLSELAERAGVAKSYLSSIERNLQSNPSVQFLEKVSSVLNVSVNT
LLHDEDEVLTGKELDSEWTQLVNEAMKSGVSKEQFREFLEFNKWKINEKRS
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
atgatcggtcaacgtatacagaaatatcgaatgcaaagaaaaatgtctttatccgaactt
gctgaaagagccggagtcgcaaaatcatatttaagctccattgaacgaaacttacaatcg
aatccttctgtacaatttcttgaaaaagtctcttccgtattaaatgtatcggttaacaca
ttattacatgatgaagatgaagtactaacaggaaaagaacttgactcagaatggactcag
ctcgtcaatgaagctatgaaatccggcgtttcaaaagagcagttccgtgaattcttagaa
tttaataaatggaaaataaacgaaaaacgttcatga
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integrated database retrieval system
