Litchfieldia suaedae: IM538_17020
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Entry
IM538_17020 CDS
T08143
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K19449
XRE family transcriptional regulator, master regulator for biofilm formation
Organism
csua
Litchfieldia suaedae
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csua03000
]
IM538_17020
Transcription factors [BR:
csua03000
]
Prokaryotic type
Helix-turn-helix
XRE family
IM538_17020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_31
SinI
HTH_19
Phage_CI_repr
HTH_26
HTH_25
HTH_37
Motif
Other DBs
NCBI-ProteinID:
QOR65496
LinkDB
All DBs
Position
3186107..3186466
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AA seq
119 aa
AA seq
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MIGDRIKSLRKQKGYSITELAVLAGVSKSYLSYIERNLQNNPSLQFLVKIASPLDTSLDF
LIGDNTKIESKSEITDKLDDEWRCIIQKAIDDGMSKDDFREYREFIRFKNWRRNRQLRD
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atgatcggtgatcgtataaaaagcttacgcaagcaaaaagggtattctattacagagctt
gcagttctagctggagtttctaaatcatatttaagttatatagaacgaaatcttcaaaat
aacccttcgttacagtttttagtaaagattgcctctcctctcgacacttccttagatttt
ttgattggtgataacacaaaaattgaatcaaaatctgagattacagataagttagatgat
gagtggagatgtattatccaaaaggcaattgatgatggaatgagtaaggatgattttaga
gagtatcgtgaattcattcgcttcaagaattggaggaggaatcgtcaactacgtgattaa
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integrated database retrieval system
