Litchfieldia suaedae: IM538_17250
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Entry
IM538_17250 CDS
T08143
Name
(GenBank) penicillin-binding protein 2
KO
K21465
penicillin-binding protein A
Organism
csua
Litchfieldia suaedae
Pathway
csua00550
Peptidoglycan biosynthesis
csua01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IM538_17250
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
csua01011
]
IM538_17250
Peptidoglycan biosynthesis and degradation proteins [BR:
csua01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
IM538_17250
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
DUF3683
DUF3139
Motif
Other DBs
NCBI-ProteinID:
QOR68981
LinkDB
All DBs
Position
complement(3223040..3225184)
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AA seq
714 aa
AA seq
DB search
MKKKKKSHVPFRLNMLFFLVFILFSALILRLGVVQIVHGENYQKQVDRTENSTVSTPVPR
GKIYDRYGRVIVDNEPLHAITYTRAQGTKAIDMVEVAEKLATYIEKDTSKLTERDIKDYW
LITRHEEAKALITKEELKLLDEKELSNSDLYQRQLDRITEADLAQISEQELEVVAIFREL
NKGYSLTPQIVKNQDVSNEEYAVVSEHLEELPGIDTTTDWEREYSYGSMLRSILGTTSTA
EEGLPREKLDFFLARGYNRNDRVGKSYLEEQYEEVLHGQKGKIENITKGNNLLETRVISE
GERGKDLVLSIDMDLQREVEKIIEEELLIAKKKPGTHFLDSAFVVMMDPKTGELLTMAGK
KYVVRNGQPELDDYALGNMNAAYTMGSAVKGATVLTGYQTGVLQVGTRLRDEPIYIKGSQ
PKKSVTTMGLIDDLTALRKSSNVYMFKTGIAIANATYRPNKALPFDEEVFPTIRNYFSQF
GLGVKTGIDLPGESTGFIGKNTSLPGFLLDLTIGQYDTYTPLQMAQYVSTIANGGYRMQP
KIVREIRQPIMEHEQLGPVVTPFQPTILNRVDMTTEQIDRVQEGFRQVMQESGGTAYGHF
GNAPYKPAGKTGTAESFYYDLEGKFGEKKKLYTAYNVTLVGYAPHDNPEVAFSVVVPFAY
ADYSDRHSINNFIGKRILDKYFELKGKDRTKTNSTEQSTKTENGPEENNSGRDE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaagaaaaagtcacatgttccttttcgtttaaatatgttatttttccttgta
tttatccttttttctgctttaatcctacgtttaggtgttgtacaaattgtccatggtgaa
aattatcaaaagcaggtagatcggaccgaaaacagtacggtgagtacacctgtacctcga
ggtaagatctatgatcgttatggacgagtgattgtggataatgaaccgctacatgcgatt
acctatacacgtgctcaagggacaaaagcaattgatatggtagaagttgctgaaaagctt
gcaacttatattgaaaaggatacgagtaagctaaccgagcgtgatataaaagattactgg
cttattactcgacatgaagaagcaaaggctctaattacgaaggaagagttgaagctacta
gatgaaaaagaattatcaaatagtgatctatatcaaaggcagttggatcgaataaccgaa
gcagatcttgctcaaatatcagaacaagagttagaggttgtagccatatttagggaacta
aataaaggttattctcttacacctcagattgtaaaaaatcaggacgtttcaaacgaagaa
tatgctgtagtaagtgaacatctagaagaactgcctgggattgatacaacaacagactgg
gaaagagagtattcatatggttctatgctaagatcgatacttggtaccacttcaactgct
gaagaggggcttcctagagaaaaactagatttctttcttgcccgtggttataacagaaat
gatagggtagggaaaagttatctagaagagcaatatgaagaggttcttcatggtcaaaaa
ggaaagattgaaaatataacaaaaggcaataatcttctggagacaagagtcatttcagaa
ggtgaacgaggaaaagacttagttttatcaatcgatatggacttacagcgagaagtagag
aaaattatagaggaagagctactaattgctaagaaaaagcctggtactcattttctggac
agtgcttttgttgtaatgatggatccaaaaactggtgagcttttaactatggcggggaag
aagtatgttgtaagaaacggacagcctgagttagatgattacgctttaggtaatatgaac
gctgcgtacacaatgggttctgctgtaaaaggtgcaactgtattaacaggttatcaaaca
ggtgtgctccaggttggaacaaggctacgagacgaaccgatttatattaaagggagtcaa
ccaaagaaatcagtaacaacaatgggtttaattgatgatttaacagcactccgaaagtct
tcaaacgtgtatatgtttaagactgggattgccattgccaatgctacttatcgaccaaat
aaggcacttccatttgacgaagaggtatttccaacgatacgaaattattttagtcaattt
ggattaggtgtaaaaactggaattgacttgccgggtgaatcaactggcttcattggtaaa
aatacaagtctacctggatttttattagacttaacgattggacaatatgatacgtatact
ccattacaaatggcacaatatgtatcaacaattgcgaatggtggatataggatgcaaccg
aagattgttcgagaaattcgccaaccaatcatggagcatgaacagttaggtcctgtcgtt
accccttttcaacctactatactaaacagagtcgacatgacaactgaacaaatagatcgt
gtacaagaagggtttaggcaggttatgcaagaaagtggtggaacagcatatggccacttt
gggaatgcaccttataagcctgctggtaagacaggtacggctgaatccttctattatgat
ttagaaggaaagtttggagaaaaaaagaaactatacactgcttataatgtaactttagtc
ggctatgctccacatgataatcctgaagttgcgttttcagtggtcgttccatttgcttat
gctgattatagtgatagacattcaatcaataattttattggaaaacgaattcttgataag
tactttgagttgaagggcaaagatcgaactaagactaattctactgaacaatctactaaa
acagaaaatgggccggaagaaaacaattcaggtagggacgaataa
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