Litchfieldia suaedae: IM538_17390
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Entry
IM538_17390 CDS
T08143
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K23774
DeoR family transcriptional regulator, catabolite repression regulator
Organism
csua
Litchfieldia suaedae
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csua03000
]
IM538_17390
Transcription factors [BR:
csua03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
IM538_17390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBS
HTH_11
HTH_DeoR
HTH_24
HTH_Mga
MarR
HTH_AsnC-type
GntR
HTH_PafC
HTH_Crp_2
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
QOR68983
LinkDB
All DBs
Position
complement(3251584..3252222)
Genome browser
AA seq
212 aa
AA seq
DB search
MITIELNKRQEKILQIVKDDGPITGEHIADRLNLTRATLRPDLAILTMAGYLDARPRVGY
FYTGKTGAQLFSDKIKKMVVKDYQSIPVVVNESVSVYDAIVTMFLEDVGTLFVVDENSVL
VGVLSRKDLLRASIGKQELSSIPVNIIMTRMPNITMCDREELLLDVAEKLIEKQIDALPV
IRETEHGFMVVGRITKTNITKAFVSLAGEEII
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
gtgattacaatagaacttaataaaaggcaagagaagattctacagattgtaaaggatgat
ggtcctattacgggggaacatattgccgatagacttaatttaacgagggccactctaagg
ccagatttagctatcttaacaatggcaggatatttagatgccagaccaagggtagggtat
ttttatacaggaaaaacaggagctcaattattctcagataaaattaaaaaaatggttgtt
aaagactatcaatcaatcccggttgttgtcaatgagagtgtatcagtgtacgatgcaatt
gtgactatgtttttagaggatgtaggaacattatttgtagtagatgaaaattctgttcta
gtgggcgttctctctagaaaggatttgctacgtgctagtataggaaagcaggagctttct
tctattccagtaaacatcatcatgacaagaatgcctaatattacgatgtgtgatcgagag
gaacttttgctagatgtagctgagaaattaattgaaaaacaaatagatgcacttccggtt
atacgagagaccgagcatggctttatggtagttggacgtataacgaaaacgaatattaca
aaagcatttgtatccttagcaggagaagaaataatataa
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integrated database retrieval system
