Litchfieldia suaedae: IM538_17560
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Entry
IM538_17560 CDS
T08143
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
csua
Litchfieldia suaedae
Pathway
csua03030
DNA replication
csua03430
Mismatch repair
csua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IM538_17560 (holA)
03430 Mismatch repair
IM538_17560 (holA)
03440 Homologous recombination
IM538_17560 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csua03032
]
IM538_17560 (holA)
03400 DNA repair and recombination proteins [BR:
csua03400
]
IM538_17560 (holA)
Enzymes [BR:
csua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IM538_17560 (holA)
DNA replication proteins [BR:
csua03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IM538_17560 (holA)
DNA repair and recombination proteins [BR:
csua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IM538_17560 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HTH_37
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
QOR65596
LinkDB
All DBs
Position
complement(3286192..3287208)
Genome browser
AA seq
338 aa
AA seq
DB search
MTQEIRKKVKNKQISSMYLFYGTETFLMNEMKEMLTSELLEEHEKDFNFAIYDLEETPIE
VALEDAETLPFMGEKRMIVLKNPYFLTGEKGKEKVEHSLDRLEQYILQPAPYSVVIFLAP
YEKLDDRKKVTKLLKQHAEVLELNALEEKDLVKWIGNRASMYQVTFEEHAAKLLIQLTGP
NLMLISKEIEKLSLYVGQEGHITQETVNLLVARTLEQNIFELIDKAVHRKLEEAFRIFYD
LLKNNEEPIKILSLLATQFRLLYQVKDMARQGYGQQQIAGMLKVHPYRVKLAAAQSNLFS
NEHLMGLVNHLAEMDFEIKNGKIDKKLAVELFLMKLNN
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgactcaagaaataaggaaaaaagtaaaaaataaacaaatcagttcaatgtatttgttt
tatggaactgaaacctttttaatgaacgaaatgaaagaaatgctaacaagtgaattattg
gaagaacacgaaaaagatttcaactttgctatttatgacttagaagaaactccaatcgaa
gtggcgttagaagatgctgaaactttaccctttatgggagaaaaaagaatgattgtgtta
aaaaatccctactttttaacgggtgaaaaaggtaaagaaaaagttgaacattctctagac
agattagagcagtatatactacaacctgcaccttattctgttgtcatttttttagcacct
tatgaaaagcttgatgatcgtaaaaaggtaactaaacttctaaaacaacatgcagaggtt
ctagagcttaatgcgttagaggaaaaagatttagtcaaatggattggaaatcgtgcatca
atgtaccaagttacatttgaagaacatgctgctaaattacttatccaattgacaggccct
aatttaatgctaatttcaaaagaaatagaaaagctttctttgtatgtaggacaagaaggt
catattacacaagaaactgtaaatctcctcgtggcaagaacacttgaacaaaatatattt
gaattaattgataaagcagtacataggaaattagaagaggcatttcgaattttttatgat
ttgcttaaaaataatgaggaaccgattaaaattctttccttgttggcaactcaattccgg
ttgttataccaggttaaagacatggcacgtcagggctatggacagcaacaaatagctggc
atgcttaaagttcatccttatagagtgaagttagcagctgcacaatcgaacctttttagc
aacgaacacctcatgggtttggttaatcatttggcagaaatggattttgaaataaaaaat
ggaaagatagataagaaacttgcagttgagttattcctcatgaaattaaacaactaa
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