Litchfieldia suaedae: IM538_18355
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Entry
IM538_18355 CDS
T08143
Name
(GenBank) endonuclease MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
csua
Litchfieldia suaedae
Pathway
csua03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
IM538_18355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csua03400
]
IM538_18355
DNA repair and recombination proteins [BR:
csua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
IM538_18355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
AAA_21
Borrelia_P83
2_5_RNA_ligase2
Perilipin
Laminin_I
SL4P
HEPPP_synt_1
DUF3584
Motif
Other DBs
NCBI-ProteinID:
QOR65748
LinkDB
All DBs
Position
complement(3445261..3447615)
Genome browser
AA seq
784 aa
AA seq
DB search
MQQRVFKVLEFGKVKEQLMKHASSSLGKQKAENLAPSTDFEEVVLLQEQTDEAVKVLRLK
GNVPLGGISDIRPSVKRAKIGSMLGSLELLDIAGTIYGGRQLKKFILTMVEDGIELPILE
SYVEGILPLMELEQSIKHCIDDNGHVMDGASDKLRSIRVQLRSSESRIREKLENIVRSSS
AQKTLSDAIITIRNDRYVIPVKQEYRGTYGGIVHDQSSSGATLFIEPQSVVDLNNTLQEA
RVQEKLEIEKILFELTGEVAEVADSILENVNILADLDFMFAKAGYSQKIKASKPTMNNDG
HIRIFKARHPLISPGEVVPNDIELGREYTSIVITGPNTGGKTVTLKTLGLFTLMAQSGLQ
IPALDGSELAVFENVYADIGDEQSIEQSLSTFSSHMVNIVDILNKVDSNSLVLFDELGAG
TDPQEGAALAISILDEVYNRGARVIATTHYPELKAYGYNREGVINASVEFDIETLSPTYK
LLIGVPGRSNAFEISKRLGLKEDVITRAKEHVSTESNTVENMIASLEKSKREAEAELTEA
ESIRKDAETLHKELQKQIQEFNDKRDKLFEKAQDKAHETINKAKQDAEEVIRELRKMRTE
QHATVKEHELIEAKRRLEEASPNLSKKKQVTSTRVNQEFQVGDEVKVISFNQKGHLLEKV
GSKDWQVQMGIMKMKVNVADLEYVSRPKPVVTKPLATVKGKDYHVSLELDLRGERFDNAL
LRVEKYIDDALLAGYPRVSIIHGKGTGALRQGVQEYLKNHRSVKSIRFGEPGEGGSGVTV
VTFK
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaacgcgtttttaaagtattagaatttggaaaagtgaaagaacagttgatgaag
catgcctcttcatcactaggtaagcagaaagctgaaaatttagcaccttcaactgatttt
gaggaagttgttctgttacaggagcaaacggatgaggcagttaaggtacttagattaaaa
ggaaatgttccattaggtggaattagtgatatacgtccgagtgttaagagagcaaaaatt
ggcagtatgctcggctctttagagttactagatatagctgggacaatctatggaggcaga
caactaaaaaagttcattcttacgatggttgaggatgggatagaacttccgatactagag
agttatgttgaaggaatccttccattaatggaattggaacagtccataaaacattgtatt
gatgacaatggccatgtaatggatggagctagtgataaactcaggtctattcgggtccag
cttagaagtagtgaatcaagaattcgtgaaaaattagaaaatatcgtacgctcatcctct
gctcaaaaaacgttgtcagatgccattataacaataagaaatgaccgatacgttattcca
gtaaagcaggagtaccggggaacatatggtggtattgtacatgaccagtcatcttcggga
gcaactctatttatagagcctcagtctgttgttgacctgaataatacgcttcaggaagct
cgtgttcaagagaagcttgaaattgagaaaatcctctttgaacttacgggagaggtcgct
gaagttgccgatagcatactggaaaatgtaaatattcttgctgacctagactttatgttt
gcaaaggctggctatagtcaaaaaatcaaagcatctaaaccaacaatgaacaatgatggc
catatacgaattttcaaagcacgtcatcctttgatcagtcctggtgaagttgttccaaat
gatatagaactaggtagagagtatacatccattgttattaccggtccaaatacggggggg
aaaactgttactttaaagaccttaggattgttcactttgatggcgcaatcgggtttacaa
atacctgccttagatggttctgaacttgcagtatttgaaaacgtgtatgctgatattggg
gatgaacaatcaattgagcaaagcttaagtacgttttcatctcatatggtgaatatagtt
gatatattaaataaagtagattcgaacagtttagttttattcgatgaattaggtgctgga
accgatccacaggaaggtgctgcacttgctatctcaattttagacgaagtatacaataga
ggtgctagagtaattgctaccacacattatccagaattgaaagcatatggatataatcgt
gaaggcgtaataaatgccagtgtagaatttgatatagagacccttagtccgacatacaaa
ttgttaatcggagtacctggaagaagtaatgcgtttgaaatttcaaaaagacttgggctc
aaagaagatgtcattactagagcaaaagaacatgttagcactgaaagcaatacggtagag
aatatgattgcatcgcttgaaaaaagtaaaagagaagcagaagcagagttaacagaggct
gaatctattcgaaaagatgcggaaactctgcacaaagaacttcaaaaacaaatccaagaa
ttcaatgataaacgtgacaaactttttgaaaaagcccaagataaggcacatgagacaatt
aacaaagcaaaacaagatgctgaagaagttatacgagaattacgtaaaatgcgcacagaa
caacatgccactgtaaaagagcatgagttaattgaagcgaagcgacgattggaagaagcg
tctccaaacttaagtaagaaaaaacaagtcactagtaccagagtgaatcaagagtttcaa
gttggagatgaagtgaaagtaattagttttaatcaaaaagggcatcttttagaaaaagtt
ggttcgaaagattggcaagttcaaatgggcattatgaaaatgaaggtaaatgtagctgat
ttggaatatgtgagccgaccaaaaccggtagtaactaaacctcttgctacggtaaaagga
aaagattatcacgttagtttagaacttgatctaagaggagaaagatttgataatgcccta
ctacgagttgagaagtatattgatgacgcacttttagcaggttatccacgagtgtcaatt
atacatggaaaaggtactggggctctcaggcaaggtgtacaagaatacttgaagaaccac
cgatctgtgaaatccattcgatttggtgaacctggggaaggtggaagtggtgttacagtc
gtcacttttaagtag
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