Litchfieldia suaedae: IM538_18380
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Entry
IM538_18380 CDS
T08143
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
csua
Litchfieldia suaedae
Pathway
csua00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
IM538_18380
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csua01007
]
IM538_18380
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csua03016
]
IM538_18380
Enzymes [BR:
csua01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
IM538_18380
Amino acid related enzymes [BR:
csua01007
]
Aminoacyl-tRNA synthetase
Class II (U)
IM538_18380
Transfer RNA biogenesis [BR:
csua03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
IM538_18380
Prokaryotic type
IM538_18380
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
B3_4
FDX-ACB
tRNA_bind
B5
DUF5405
Motif
Other DBs
NCBI-ProteinID:
QOR65753
LinkDB
All DBs
Position
complement(3451450..3453864)
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AA seq
804 aa
AA seq
DB search
MFVSYKWLSEYVDLSGITASELADKITKSGIEVEGIETLNEGISGVVVGYVVEREKHPDA
EKLNKCLVDIGEEEKVQIICGAANVDKGQKVAVAKVGAVLPGNFKIKKAKLRGEESHGMI
CSLQELGIESKLVSKEYAEGIFVFPNDVEVGSDVLEHLNRNDQVLELGLTPNRADCLNML
GVAFEVAAILGRDVKFPSIELSTNSEQTSDYISLAVEASEDNPLYVAKIVKGVKIGPSPL
WLQTRLMSAGIRPHNNVVDITNYVLLEYGQPLHAFDYDRLGSKEIVVRRAYDGEKITTLD
DAERTLTNDHLAITNGKEPVALAGVMGGADSEVRSDTTTVLIESAYFTGATIRKASKDHG
LRSEASTRYEKGIDPTRTREAADRAASLMVQLAGGEVVGGSVEVDTLSTDATVVSVTLNR
INNVLGTSINKDVVSQIFTNLKFEFLEDNETYTVTVPSRRGDITIEEDLIEEVARLYGYD
AVPTTLPIGEGTPGRLTEYQQKRRLVRRYLEGAGLYQAVTYSLTSETKVNQYALEAATPI
RLAMPMSEERSLLRLSVVPHLLEVVSHNVARQIDSVAIYETGSVFLSNSDNELPVEKEHL
AGAVTGLWQSHPWQGEKKAVDFYVVKGVLDGLFQLLGLESRIEYQQTTIDGLHPGRTAMV
NLDGKSIGFIGQIHPTVQKEQDLNETYVFELSLKDLLEAEVEAITYNAIPRYPSMTRDIA
LVVDKKVAAGDIQKTITEVGGKLLKTVSIFDLYEGDKMEAGKKSVAYSLRYFDPERTLTD
EEVTKTHNKVLKAVEEQFAATLRS
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtttcatataaatggttgtctgaatatgttgacttaagtggaattactgcttca
gaactagcagataaaatcacaaaaagtggaattgaagtcgaaggtattgaaacgctaaat
gaaggtattagtggagtagtggtaggctatgtagtagagcgtgaaaagcatccagatgct
gagaagttaaataaatgtcttgttgacattggtgaagaagaaaaagttcaaattatttgt
ggagcggctaatgtagataaaggacaaaaggtggctgttgctaaggttggagcagtttta
ccaggtaattttaaaatcaaaaaagcgaagcttcgtggtgaagaatcacatgggatgatt
tgttcactacaagaacttggtattgagtcaaagttagtatcaaaagaatacgctgaaggt
atttttgtgttccctaatgatgtggaagttggttctgatgtgttagagcatttgaatcga
aatgatcaagtattagagcttgggcttacaccaaatagagcggattgcttaaatatgctc
ggagttgctttcgaggtagcagcaattcttggaagagacgtaaaatttccttccatcgaa
ttatcaactaattcggagcagacaagtgattatatatcactagcagtagaagcaagtgaa
gataatcctttatatgtagccaaaattgtaaaaggtgtaaaaattgggccatctccactg
tggcttcaaactcgcctgatgtcagcaggtattcgcccacacaataatgtagttgatatt
acaaattatgtattacttgaatatggtcagccgcttcatgcattcgactatgatcgactt
ggttctaaggaaatagtagtaagacgtgcttatgatggggaaaaaatcactacgttagat
gatgctgagcgaacgttaacaaacgatcatctagccattacaaatggtaaggagcctgtc
gccctagctggtgttatgggtggtgctgattctgaggtacgttcagacacaacaactgtt
ctaattgaatctgcttattttacaggtgctacaattcgcaaagcgtcaaaagaccatgga
ttgcgaagtgaagcaagtacacgctatgaaaagggaattgatcctacccgtacacgtgaa
gctgctgaccgtgctgcatcactaatggttcaacttgcgggtggtgaagtagttggtggg
tctgttgaagttgatacattatcaacggacgctacagttgtatctgtaacattaaataga
attaataatgttttgggaacatcaataaataaagacgtagttagtcagattttcacgaat
ctcaagtttgagttccttgaagataatgagacttatacagttacggttccttctcgtcga
ggggatataacaattgaagaagatcttatagaagaagttgctcggctttacggttatgat
gcggtaccaacgactttacctattggtgaagggacaccaggaagattaactgaataccag
cagaagcgtcgtctagttcgacgatatcttgaaggagcaggtttatatcaagcagtaaca
tattcactaacaagtgaaacaaaagtaaatcaatacgctttagaagctgcaactcctatt
cgacttgcaatgccgatgagtgaagagagaagtttactacgattaagcgttgttcctcac
ttattagaagttgttagtcataatgttgcacgacaaattgactcagttgctatttacgaa
acaggttctgtattcctttcaaatagtgataatgaactacctgtggaaaaggaacattta
gcaggagccgtaacagggctctggcagtcacatccatggcagggagaaaagaaagcagtc
gatttctatgttgttaaaggagttcttgatggtctcttccaattgcttggtttagagagt
cgaatcgaatatcaacaaacgacaattgacggacttcatccgggtagaacagcaatggtt
aatttagatggtaaatcaattggatttataggtcagattcaccctacagtccaaaaagaa
caagacctcaatgagacgtatgtttttgagttatctttgaaggacttacttgaagcagaa
gtagaagcaattacctataatgctatcccacgttacccatctatgactagagatattgct
cttgtcgttgacaaaaaagttgccgctggcgatatccaaaagacgattactgaagtcggt
ggaaagttattaaaaaccgtttctattttcgacctgtatgagggagataaaatggaagca
ggtaaaaaatctgttgcttactcacttcgttacttcgatccagaacgaacattgacagat
gaagaagttacaaaaacacataataaagtattaaaggctgtagaagaacagttcgctgca
accttacgttcataa
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