Litchfieldia suaedae: IM538_18630
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Entry
IM538_18630 CDS
T08143
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
csua
Litchfieldia suaedae
Pathway
csua03030
DNA replication
csua03410
Base excision repair
csua03420
Nucleotide excision repair
csua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IM538_18630 (polA)
03410 Base excision repair
IM538_18630 (polA)
03420 Nucleotide excision repair
IM538_18630 (polA)
03440 Homologous recombination
IM538_18630 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csua03032
]
IM538_18630 (polA)
03400 DNA repair and recombination proteins [BR:
csua03400
]
IM538_18630 (polA)
Enzymes [BR:
csua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IM538_18630 (polA)
DNA replication proteins [BR:
csua03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
IM538_18630 (polA)
DNA repair and recombination proteins [BR:
csua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
IM538_18630 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IM538_18630 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QOR65802
LinkDB
All DBs
Position
complement(3500716..3503346)
Genome browser
AA seq
876 aa
AA seq
DB search
MTKKVVLIDGNSIAYRAFFALPLLSNDKGVHTNAIYGFTMMLMKILEDEKPSHILVAFDA
GKTTFRHKTFGEYKGGRQKTPPELSEQFPFLRELLDAYKIKRYELENYEADDIIGTLSAK
AEEEGYTVKVISGDKDLTQLASDNITVDITKKGITDVDSYTPAFVQEKYGISPEQIIDMK
GLMGDSSDNIPGVPGVGEKTALKLLKEFGTLEKLLESIDQVSGDKLKEKLSENREQALMS
KELATIFREAPVEVGIDTIKYDGYESSKLIAIFKELGFNSLLDKLGVSEEEDTTALEDVD
YKIVSDVTEDIFAKESTLIVEILEENYHQADILGFAIVNETGNFFIPTDVALKSKEFKTW
AEDEQQLKNVFDAKSSIVGLRWKGIQLKGIDFDCLIASYILNPSESTVDIASIAKVKGYG
NIQADETVYGKGAKRTIPQQDVLAEHLIREAKALHYLKDKLNEELVENEQLELFTELELP
LTLILAEMEATGITVDVERLKSMGEELRQKLSSLEQTIFASAGEKFNINSPKQLGSILFE
KLNLPPVKKTKTGYSTSADVLEKLANKHEIIEHILHYRQLGKLQSTYIEGLLKVIYEDSC
KIHTRFNQVLTQTGRLSSIDPNLQNIPIRLEEGRKIRQTFIPSQKDWVIFAADYSQIELR
VLAHIANDENLIEAFNKDLDIHTKTAMDVFHVSAEEVTGDMRRQAKAVNFGIVYGISDYG
LSQSLGITRKEAGQFIERYLESFPGVKNYMEEIVQDAKQKGYVSTLLQRRRYIPEITSRN
FNVRSFAERTAMNTPIQGSAADIIKKAMIDMADRLVEEKLESKLLLQVHDELIFEAPKHE
IERLEIIVPEVMENAVKLEVPLKVDYSYGPTWYDAK
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaaggtagtattaatagatggaaatagtattgcttatcgtgctttttttgcc
ttaccactactaagcaatgacaaaggtgtacatacaaatgcaatttatgggttcacaatg
atgctcatgaaaattctagaggacgagaaaccatctcatatcttagttgcattcgatgca
ggtaaaacaacgttccgtcataaaacgtttggagaatacaaaggtggacgccaaaaaaca
ccaccagaattatcagagcaatttccatttttaagagaattattagatgcctataaaatt
aagcgttacgagctagaaaattacgaagcagatgatattattggtactctttcagcaaag
gcagaagaagagggatataccgtaaaggtaatctcaggagacaaagatttaactcaactg
gcatctgacaatatcacagttgatattaccaaaaaagggatcacagatgtagattcctat
accccagcatttgttcaagaaaagtatgggattagtcctgaacaaattatcgatatgaag
ggtctaatgggagatagttcagataatatccctggtgtgccaggtgttggtgagaaaaca
gcacttaaattacttaaagaatttgggacattagagaaattacttgaatccatagatcaa
gttagtggagataaactaaaggaaaagttatcagaaaatagagagcaagctttaatgagt
aaggaactagcaaccatattcagagaagctcctgttgaagttggtatagatacaattaaa
tatgatgggtatgagtcatcgaaactaatagcaatatttaaagaactaggattcaattca
ttactggacaagctcggagtatcagaagaggaagacaccacagccttagaggatgtggat
tacaagattgtatctgatgttactgaggatattttcgctaaagagtctactttaatagtg
gagatacttgaagagaattatcatcaagcagatatcctgggttttgctattgtaaatgaa
actggaaacttctttataccaactgatgttgctctgaaatctaaggagtttaaaacatgg
gctgaagatgagcaacaactgaaaaacgtatttgatgcaaaaagctccatcgttggctta
aggtggaagggaattcaattaaaaggaattgattttgattgtttaattgcctcgtatatt
cttaatccatcagaatcaactgttgatattgcttcaattgccaaagtaaagggatatgga
aatatacaagcagatgagacagtgtatggaaaaggtgcaaaacgcacgattccacaacag
gatgtacttgccgagcatttgattagagaagcaaaagcactacactatttaaaagataaa
ttaaatgaagaattggttgaaaatgagcaacttgaactgtttacggagcttgaattgcca
cttaccttaattttagctgaaatggaagcaacaggtataacagttgatgtcgaacgatta
aaatcgatgggagaagaattaaggcagaaactaagttctttggaacaaacaatctttgcg
agtgcaggagaaaagtttaatatcaattcgcctaaacaactcggttcaatccttttcgaa
aaactcaacttaccacctgttaaaaagactaagaccggctattcaacatcagctgatgtc
ctagaaaagttagcaaacaagcatgaaataattgaacatattcttcattatcgacaactc
ggtaaactacaatcgacctatattgaaggattattaaaggtcatttatgaagattcatgt
aagattcatacaaggtttaatcaggtgttaacgcaaacagggagactaagttcaattgat
ccaaatttacaaaacatccctattcgattagaagaaggaagaaaaattagacaaaccttt
atcccttcgcagaaggattgggttatctttgcagcagactactcacaaattgagttaagg
gtacttgcacatattgcaaatgatgaaaacttaatcgaagcgtttaacaaggatttagat
atacacactaaaacagcaatggatgtattccatgtatcggctgaggaagtaaccggagat
atgagacgccaagcaaaagctgttaattttggaatcgtatatggaattagtgattacggt
ctttctcaaagtctaggtattaccagaaaggaagcaggtcaatttatagagcgatatttg
gaaagtttccctggtgtgaaaaactatatggaagaaatcgttcaggatgcgaagcagaag
ggctatgtttcaactttacttcaacgtcgtcggtacatcccagagatcactagccgaaac
tttaatgttcgtagctttgcagaacgcacagctatgaatactccgatacaaggaagcgct
gcagacattatcaaaaaagcaatgatcgatatggcagatcgtctagtagaagagaagtta
gaatcaaagctattgctccaagtacacgatgaactgatttttgaagcacctaaacatgaa
attgaacgtttagagataattgtaccagaggtaatggagaatgcagtcaaacttgaggtt
ccgttaaaggttgattactcatacggtccaacttggtatgacgcgaaataa
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