Litchfieldia suaedae: IM538_19110
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Entry
IM538_19110 CDS
T08143
Name
(GenBank) rRNA pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
csua
Litchfieldia suaedae
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csua03009
]
IM538_19110
Enzymes [BR:
csua01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
IM538_19110
Ribosome biogenesis [BR:
csua03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
IM538_19110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
4HB_KIF14
Motif
Other DBs
NCBI-ProteinID:
QOR69001
LinkDB
All DBs
Position
complement(3606443..3607156)
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AA seq
237 aa
AA seq
DB search
MLSTVGFGSRKEVKALLKSGAVKIEGQIIKDSGKHVNPEEQTVTVHGEPVVYKEFIYLML
NKPPGVISATEDSMHQTVIDLLEMEDAIYEPFPVGRLDKDTEGLLLLTNDGQLSHQLLSP
KNHVPKTYFAIIEGEVTSEDVVKFKEGVVLEDDYKTLPADLVILKQGISSDIEVTITEGK
FHQVKRMFEAVGKRVVYLQRIKMGPLSLDETLELGEYRELTEEEVELLKNANVKSDQ
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgttatcaacggttggttttgggagtcgtaaggaagttaaggctctgctgaaatctggg
gctgtgaaaatagaaggacagataataaaagattctggaaagcatgttaatccagaagaa
cagacagtaactgttcatggtgaaccagttgtttataaagagtttatctatttaatgctt
aataaaccacctggtgttatttcagcgacagaggattcaatgcaccaaacagtgattgat
ttgctcgaaatggaagatgccatctatgaaccctttcctgtaggaagattagataaggat
acggaaggtctactgttattgacgaatgatggtcaactatctcaccagcttctttcccct
aagaatcatgtaccgaaaacgtattttgcaatcatcgaaggagaagtaacgagtgaggat
gtggttaaatttaaggaaggtgtagttctcgaggatgactacaaaacactacctgcagat
ttggttattttaaaacaaggaatctcatctgatattgaagtaactatcacagaaggaaaa
ttccatcaggtaaaacggatgtttgaggcggttggaaaaagagtggtttatttacaaaga
attaaaatgggtcctctctcattagatgaaacattagaattaggagagtacagagagctt
acagaagaagaagttgaattattaaaaaatgcaaacgtgaaaagcgaccagtaa
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integrated database retrieval system
