Litchfieldia suaedae: IM538_20685
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Entry
IM538_20685 CDS
T08143
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
csua
Litchfieldia suaedae
Pathway
csua02020
Two-component system
csua02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IM538_20685
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
IM538_20685
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
csua02035
]
IM538_20685
Bacterial motility proteins [BR:
csua02035
]
Flagellar system
Chemotaxis proteins
MCPs
IM538_20685
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
Mce4_CUP1
Herpes_UL36
TMP_3
ISG65-75
Motif
Other DBs
NCBI-ProteinID:
QOR66158
LinkDB
All DBs
Position
complement(3899325..3901007)
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AA seq
560 aa
AA seq
DB search
MKSIRTKLLLGFGVILLLVVSMSAFTIFNSITNNNIANELVTDDLEELVIYETLRFNMAE
RVAVTRGYLLYGDIELKEKFFQYTEESQSLEKELEKYLSESESELAYEIIEKSKAWGDYT
KEKVYDIYALNKTLADENNKLARPQAEELMELLGTAVKTEASTVNEMGNQIVSNAKATER
SNLVIAIVVLLAGIGIALLVARIIVKPILQVVDRLQLVAEGDFSGGDMVIKSKDEIGTLV
NTMNKMVSGLREVIQKVRYTSEQVAASSEELTASAEQTSKATEQISIAIQEVSEGSTQQV
ATVTQTNDIVVEISKGMEQVANSIQSVAELTVETTEKSTTGNAVVNRTIEQMNDVQKQVA
DTSAVINALGAKSNEIGQIVDLITQIANQTNLLALNAAIEAARAGEHGRGFAVVADEVRK
LAEQSGQAAGQISSIVAQIQDESLKAVESMELGTTSVVEGIDMVRQTGESFKDITKMIEV
ISSQSQEVSAIVEEVNAGSTGMVQMIEEVANISEQSAGNSQNVAASAEEQLASMEEIASS
ANSLSQMAEELQNLVRKFKI
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatccattcgaacgaaattattacttggttttggagttattttattattagttgta
tctatgtcagcttttacaattttcaattcaataacaaataataacatagctaatgaatta
gttacagatgaccttgaagagttggttatatatgagacccttcgttttaatatggcagaa
cgagtagcagtaacgagaggatatcttctttatggtgatatcgaattaaaggaaaaattt
ttccaatatactgaagaaagtcagagtttagagaaggaattagagaaatatctatcagaa
agtgaaagcgagcttgcttatgaaattattgaaaaaagtaaggcttggggagattatacg
aaagaaaaagtctatgatatttatgctttaaacaaaacccttgcagatgaaaataataag
ctagcaaggccacaagctgaggagcttatggaactattaggaacagcggtaaaaactgag
gcatctactgtcaatgagatgggaaatcaaattgtaagcaatgcaaaggcaacagagagg
tcgaaccttgttattgcaattgtcgtgttacttgcaggtatcggaattgcactccttgtt
gcaagaattattgtaaaaccaatcttacaagtcgtagaccgattacaacttgttgctgaa
ggtgatttttcagggggagatatggtgataaaatcaaaggacgaaataggtactttagtt
aatacgatgaataagatggtttctggacttagagaagtgatccagaaagtacgctacacg
tcagaacaagtcgctgcttcatcggaagaacttactgcaagtgcagaacagacgagtaaa
gctactgaacaaatttccatcgcaatacaagaggtttctgaaggatcaacccaacaagtt
gcaacggttacgcaaacaaatgacattgtcgtagagatttctaaaggtatggaacaagtg
gcaaattcaattcaatcggtagcggagttaactgtagagacaactgaaaagtcgacaaca
ggtaatgcggtcgtaaaccgaacaattgaacaaatgaatgatgttcagaaacaagttgca
gatacgtctgctgttattaatgccttaggtgctaaatcaaatgagataggtcaaattgtt
gatcttattacacaaattgcaaaccaaactaaccttttagcgttaaacgctgcaattgaa
gcggcaagagctggggaacatggacgcgggtttgcagttgttgcagatgaagtgagaaag
cttgctgaacagtcaggacaagcagccggtcaaattagtagtatcgtagctcagattcaa
gatgaatcattaaaggctgtagagtccatggaattaggaactacttctgttgttgaaggt
attgatatggtacgtcaaacgggcgaatcttttaaagatattactaagatgattgaagtt
atttcttcccaatcacaggaagtatcagcaatagtggaggaagtaaatgcagggtcaacg
ggaatggttcaaatgattgaagaagtagcaaacattagtgaacaatcagctggaaattca
cagaatgtagctgcgtcagcagaggaacaacttgcatctatggaagaaatcgcctcttca
gcaaactcattatcacaaatggcagaagagttacaaaatctagtaagaaagtttaagatc
taa
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