Litchfieldia suaedae: IM538_20700
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Entry
IM538_20700 CDS
T08143
Name
(GenBank) hypothetical protein
KO
K08482
circadian clock protein KaiC
Organism
csua
Litchfieldia suaedae
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
IM538_20700
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATPase
PAXNEB
GvpD_P-loop
AAA_25
SLFN-g3_helicase
DUF7125
nSTAND3
ATPase_2
ApoA-II
DUF6836
Motif
Other DBs
NCBI-ProteinID:
QOR66160
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Position
complement(3902126..3903523)
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AA seq
465 aa
AA seq
DB search
MKITSGIKGLDIILQGGIPLHSSVLLEGSPGTGKTTLGIQFLVEGAKNNEPGIYLSFEEF
PSQIYQDMKPFGWDLKNNELIRVIGISPETIVKDMLNPDGLFDKLINDTGCKRLVLDSLS
VINYLIRDEYELRSSVYTFRNILRKKGITSLIITEENDNNCFEHYIFDGVLKLKKTEMIE
GVPQRTLEILKMRGSDYIPGNHTYRLNNAEGVYLLPMNRGIKNIPLVSTEIIPTDVKGLD
LILGGGLPKGEVFLLDIDSNSNYKIFLVSLMASQLKRGDKVFVLLPDDLTISQLNKFFEQ
YGLDLYHLIKCQDLLIMDQYNRITDEELYPFILKIDNLSNEEFSDFIQKNIRSMLLERKN
QGEQWLIIYDMNAALHRRGEQYIKNMLPIVTGITRSLDFTSIRICNTRETSTITSEQIKR
KSTGIIKIWSDSKYQYIKVDKSPTGFTSKPFIMEEINKQPYFKFV
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaattacaagtgggataaaagggcttgatatcattctgcagggtggtattccctta
cattctagcgttcttttagaaggttcccctggtacaggaaaaacaacactaggtatacaa
ttcctggttgaaggagcaaaaaataacgagccagggatttatttgtcctttgaggagttt
ccaagtcaaatctatcaagatatgaagccgttcggatgggatttaaagaataatgaatta
attcgagtcattggaatatctccagaaacgattgttaaagatatgttaaatcctgatggc
ctttttgataaacttatcaatgatacgggttgtaagaggttagtcctagacagtctgagc
gttataaattatttaattagagacgaatatgaattgcgtagctcagtttatacatttaga
aatattttacgaaaaaaaggcataacttcgttaattattacggaggaaaatgataataat
tgcttcgaacattatatctttgatggagttcttaaacttaagaaaactgaaatgatagaa
ggggtaccgcagcgtaccttggaaatcttgaagatgcgagggtcagattacattccagga
aaccatacgtatcgattaaataatgctgaaggggtatatcttcttccaatgaaccgaggc
attaagaatatccccttagttagtacagaaattattccaacggatgttaaaggtttagac
ttaattcttggtgggggtttaccaaaaggcgaagtattcttactagatattgatagcaac
tccaactataagatttttcttgtctcacttatggcaagtcaattaaaacgaggggacaaa
gtatttgttctattaccagacgacttaacgataagtcaattaaataaattttttgagcag
tacggacttgatttatatcatctaattaaatgtcaggacttgctaattatggatcagtat
aatcgtataactgatgaggaattatacccgtttatactaaaaattgataacctatctaat
gaagagtttagtgattttatccagaaaaatattagaagtatgttattggagcgaaaaaat
caaggggagcagtggttaattatttacgatatgaatgcagcccttcatcgcagaggagaa
caatacattaaaaacatgcttcctattgtaactggaattactcgaagccttgattttacc
tctattaggatatgcaatactagggagacttccactataacctcggagcaaattaaacgt
aaatcaacaggcattattaaaatttggtcagatagtaaatatcaatacattaaggttgat
aaatctccaaccggatttacctctaaaccatttattatggaagaaataaataagcaacct
tattttaaatttgtttaa
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