Litchfieldia suaedae: IM538_21190
Help
Entry
IM538_21190 CDS
T08143
Name
(GenBank) PD40 domain-containing protein
KO
K02406
flagellin
Organism
csua
Litchfieldia suaedae
Pathway
csua02020
Two-component system
csua02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IM538_21190
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
IM538_21190
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
csua02035
]
IM538_21190
Bacterial motility proteins [BR:
csua02035
]
Flagellar system
Flagellar assembly proteins
Filament
IM538_21190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Flagellin_N
Flagellin_C
PD40
Motif
Other DBs
NCBI-ProteinID:
QOR66247
LinkDB
All DBs
Position
complement(3998023..4001490)
Genome browser
AA seq
1155 aa
AA seq
DB search
MYIPGNQLMKSFTNQMKRSQTNIQKNIEKLATGQRIKAASNDAAGLAISQKLSALSRGSN
QALRNVQDASAMVQVADGAMQEMTDILQRIRELTIQSMNGTNSEIKGTIHTNADTLVIQN
EVDELKKELNKIVEHTEFNNTKLLTNKEYGEYLYENRITTKTIQLSQISQTNYVDVENNN
VGSNTLSPVTLTHNQNRVFSPTVLSTISQPESYIGTTVMDHLPRWSSDGSSIIFTSNRDS
QNYTLLADGSVDPALDSGTSIVSQQTLSSNGLMRLRNVDSVLYLEKRSSVYGSWTSVQSY
SYNYPNDNNGGYSFSPKVDSSGNTSFVYSDNQGNLKKVDVNINTFSVSSPVDLISTTDTL
NVTTTNNTINLPSSPNLYNMNTMNTSLRIEKVNDSGSRILTFWDGIGVAPTEGYYTVSGR
TVTFFNDAIIGSESLDDAQDYYRFSYTSDGVGDKVYTTSIPTNAEIYNMHGEDGPRSLSI
FVGGTEVQRNQLLSTQPSDHDSVTGVYVNTSTGKIEFYGDLRPAYNENVTIKNLNYDADG
RNQTYSVSLGTAIDTYNLSSSDPLANRSIRVSIDNNTVPYDESKVDGYYYDPSNGRISFY
GSYRPDLPSNPSIKIEYVTDNSYSSTSRDVYGIPLSYNYPEVYNLGSQTAPNSIRVLRNG
SEEIAYSAENGYQYNANTNTIELYGISRPNVGDTYTIQMIAATSSIKQLDGKVEVPLYHS
PETYGVTDPSIPSTFLVKVDGNEVNYDSTKTNGYFYNSGTNTIEIYGDARPEAKDSSNPD
VQVFYVYESPSTSVGNDSYDIRLDSRTLDYGLVNPDEPTAISVYYKGTEVPYNEQNGFTY
NSSNNQLSLHGTYRPENVDSTGDYSVFFVTANDLQTTVPTNSYIYKVEMNGQEIQRAQNS
SGDGYIYNGQTIEIVGGARPDITNNTSQIQLNVQYFDSLDIQLNDHMPNDYFHNYCNHEA
GADLLESEIDPTALMVSLNGSLLTAEQYSLQDNRIVLKQETLDLTQGSHSLSVDYRVRQG
IGYQPNGFTYQTGANSGQSLKVEFASFDNMLRGTNVICVRNYEDAEQGLKVIDHALDFVL
SELGNVGAVENRLDHIAANLANSHENTSASLSRIEDTDMAKEMMNLAKEQILSQAQIAMG
AHLKQSNMQVLELIK
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcccaggcaatcaactaatgaaatcatttacgaatcaaatgaaacgttcacaa
acaaatatacaaaaaaatattgaaaaattagcaacaggacaacggattaaggctgcctct
aatgatgcagcgggtttagcgattagtcaaaagctttccgctttatcgaggggaagcaat
caagcacttcgaaatgtacaagatgccagtgctatggttcaagttgcagatggtgcaatg
caagaaatgaccgatatccttcagagaattcgcgaactaactatccaatcaatgaatgga
actaatagtgagataaagggtacgattcatacaaatgcagatactttagtgattcaaaat
gaggttgacgaattaaaaaaagaactaaataaaatagttgagcatactgaattcaataac
accaaactccttactaataaagagtatggtgagtacttatatgaaaatcgtattacaact
aagacaatccaattatcacagatatcccaaacaaactatgtcgatgttgaaaataataat
gtcggaagtaatacattaagcccggttacccttacccataatcaaaatagagtgtttagt
ccaacagtactctcaacgattagtcaaccagaatcctacattggtactacagtcatggat
catttaccgagatggtcatcagatgggtcctctattatatttacatcaaatagggatagt
caaaattatacgttactggccgatggaagtgtagaccctgctttagatagcggaacttcc
attgttagtcaacaaactctttcaagtaatggtctaatgaggctgcgtaatgttgactct
gtgctatatttggaaaagcgttcctcggtctacggttcttggacaagtgttcaatcatac
tcatataactatccaaatgataataatggaggttatagtttttcaccaaaggtagattca
agtggtaatacctcctttgtgtattctgataaccaaggaaacttgaaaaaggtagatgta
aatattaatacatttagtgtaagttcaccggttgatttgatctcaactacagatacatta
aatgtaacgaccacaaataatactataaatctaccgtcaagcccaaatttatataacatg
aatactatgaatacatcactcagaatagagaaggtaaatgattctggttcaagaatttta
accttttgggatgggataggtgttgcaccgacagagggctactatactgtttctggtaga
acagtaaccttttttaatgatgctatcattggttcggaatcacttgatgatgctcaagat
tattatcgtttttcttatacatctgatggtgttggagataaagtttatacaacttccatt
ccaacgaatgcagaaatttataatatgcatggtgaagatggccctcgttcacttagtatt
tttgtaggaggcactgaggtccagagaaaccaacttttatcaacacaaccatcagatcat
gattcggttactggagtatacgtaaatacatctactggaaaaattgaattttatggtgac
ttacgtcctgcatataacgaaaatgttacaattaaaaacctgaattacgacgcagatgga
aggaatcaaacttattcagtgtctttaggtacagcaattgatacttataatttatctagt
tcagatccactagcaaaccgatcgattcgagtatcaattgataataatactgttccatat
gacgagagcaaggtagatggttactactatgacccatctaatggacgcattagtttttat
ggtagttatcgtccggatttaccaagtaacccttctatcaaaattgagtatgtaacagat
aattcgtattcaagtacttcacgtgatgtttatggaattccattatcttataattatcca
gaagtctataatctaggaagtcagacagctccgaattcgattagagttttgagaaacggt
tctgaggaaattgcttattctgctgaaaatggctatcagtataatgcaaatacaaataca
atcgaactctatggcattagtcgtccaaacgtaggtgacacatatacgatccaaatgata
gctgcgacaagtagcataaagcaacttgatggaaaagtagaagttccgttatatcattct
cctgagacttacggggttacagatccatccataccatcaacatttctagtgaaagtagat
ggtaatgaggttaactatgattcaacaaagacaaatggttatttttataatagtggtaca
aatacgattgaaatttatggtgatgcgcggcctgaagctaaggactcttcaaatcctgat
gttcaagttttttatgtgtatgaaagtccctcaactagcgtaggaaatgattcttatgac
attcgtttggattccagaacattagattatgggcttgttaacccagatgaacctacggct
ataagtgtttattataaggggacagaagtaccatataatgagcaaaatggttttacctat
aattctagtaataatcaactatcattacatggtacttatcgtccggaaaatgtggattca
acaggagactatagtgtattctttgtaactgcaaatgatttacagacgacagtaccaaca
aattcctatatttataaggtagaaatgaatggacaagaaatccaaagagcacaaaactcc
tcaggtgatgggtatatttacaatggccaaacgattgaaattgtaggtggagctagacca
gatattacaaataacacttcccaaatccaactgaatgttcaatattttgactcgttagat
atacagttaaacgatcatatgccaaatgattattttcataactattgtaatcatgaagca
ggtgcagatttattggaatcggaaattgatccaactgctttaatggtttcattgaacggg
agtctattaacggctgaacagtattctttacaagataatcgtattgttttaaaacaagaa
acgttagatttaacccaaggtagtcattctctttcagtggattatcgggtgcgacaaggg
atcggatatcaacctaatggttttacttatcaaacaggtgcaaattctggacagtctctt
aaagtagaatttgcatcctttgataacatgctaagaggaaccaatgttatttgtgttaga
aattatgaagacgccgaacaagggttaaaagtaattgaccatgcattagattttgtttta
agtgaacttgggaatgtaggtgcggtagaaaacagacttgaccatatagctgcaaattta
gctaatagtcatgagaatacttccgcctctttaagtagaatagaagatactgatatggcg
aaggaaatgatgaacttagcgaaagagcaaatactttcacaagcacaaatagcaatgggt
gcacatttgaagcaatctaatatgcaagtattagaattgattaaataa
DBGET
integrated database retrieval system