Litchfieldia suaedae: IM538_21480
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Entry
IM538_21480 CDS
T08143
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
Organism
csua
Litchfieldia suaedae
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Gene cluster
GFIT
Motif
Pfam:
LysM
LysM3_LYK4_5
LysM1_NFP_LYK
RBD_ZCCHC3_1st
Motif
Other DBs
NCBI-ProteinID:
QOR66304
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Position
complement(4072934..4074655)
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AA seq
573 aa
AA seq
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MFLSHKVVQEEGSKVVTLYLDPQLTEFASEFPNEQEEKGFRYSVYRYVQTNLPTVKANVI
KVMAGSVLVAVLPFNSDKAAAAESSSPTVQAKAENTYTVQSGDSLYLIAKRIGVSVDQLK
KTNNLTSDTIYVWQVLTVPTGETTSTTTDSVMKGPKGEIGYVKITKRINLWKRDSSGKLE
FVRVLNPGESYRVYGEDQLHGGQYDVGARHYITKMTGYVEFEKVGESPTVVNEQTTQSTP
TQDSFVRGSRGEIGHIHIKKRINLWKRVNGKLEYVRVLNPGETYRVYGRDQQFGGQFDVG
SNHYITNISGFVDFQLFNSTPSEVSGNYYTVRSGDTLSGIAAKFGTTVQKIKELNNLTTD
FIYANQKLIIEGNTSALNSKTYITHTVSQGDTIWDISIKYGIPQAELLKDNNLTTQSVLK
LGQVLRVPQYQIAVKDTVSPRHGEVLDWWTEAQYVFPIGAIATVTDFETGVSFKVKRTVG
ANHADSEPLTAADTEIAKSVWGGFSWKERAVIVEVNGRKIASSMSFMPHDVQYITDNNFN
GHFDIHFSNSTRHMDGQIDVAHQNQIKIAGGIS
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgttcctatctcataaagttgtacaagaagaagggtctaaggtagtaacgttataccta
gatccgcaattaaccgaatttgcctctgaatttcccaatgaacaagaggaaaaaggcttt
cgctatagtgtatatcgttatgttcaaacaaatttaccaactgttaaggcaaatgtcatc
aaagtaatggcaggctcagtgctcgttgcagtccttccgtttaatagtgataaggcagct
gcagctgaatctagttctccgactgtgcaggctaaggctgaaaatacatacactgtacaa
tcgggagattcattataccttatagcaaagcgaataggagtatctgtagatcagttgaaa
aaaacgaataatctcacaagtgatacgatttatgtttggcaggtactcacagttccaact
ggggagacaacctctactacaactgattctgtcatgaaggggccaaaaggtgaaattgga
tatgtgaaaattacaaagcgcatcaacctttggaaacgagattctagtggaaaactggaa
tttgttcgtgtcttaaaccctggagaaagctaccgtgtatatggtgaggatcaattgcat
ggtgggcaatatgatgttggtgcaaggcactatataacaaaaatgacaggctatgttgaa
tttgagaaagtaggggaaagtccgacagtagtcaatgaacaaacaacacaaagtactcca
acccaggattcgttcgtcagaggttcacgtggcgaaattggacatatccacattaagaaa
cgtattaatctttggaaaagagtcaatggcaagctagaatacgtaagggtgctaaaccct
ggtgaaacgtatcgagtatatggaagagatcaacagtttggcggacaatttgatgtcgga
agtaaccactatattaccaacataagcgggtttgtagactttcagttgtttaatagcaca
ccttctgaggtgtcggggaattactacaccgtacgatccggtgatactctatctggtatt
gcagcgaagttcgggacaactgtccaaaaaattaaggaacttaataatctaacgactgac
tttatttacgctaatcagaaacttataattgaaggcaatactagtgcactgaatagtaag
acttatattactcatacagtaagtcaaggtgataccatttgggacatttccattaaatac
ggtataccccaagctgaactattgaaggataacaatttaacaacgcaatcggtactcaaa
cttggtcaggtgctgcgtgttccgcaatatcaaatagccgttaaagacactgtgagccct
cgtcacggtgaggtattagattggtggactgaggctcaatatgtcttcccaatcggtgca
attgcaaccgtaacggacttcgagacaggggtatcgtttaaagtgaaaagaaccgttggt
gccaatcatgcagacagtgagccattaacggctgctgatactgaaattgcaaagagtgta
tggggtggttttagctggaaggaacgtgcagtgattgtcgaagtaaacggacgcaaaatt
gcttcctcaatgagctttatgccacatgatgtccagtacattactgataacaactttaat
gggcattttgatattcactttagcaatagtaccaggcatatggacggtcaaatagatgta
gcccaccaaaaccaaataaaaatagctgggggaatcagctag
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