KEGG   Litchfieldia suaedae: IM538_22065
Entry
IM538_22065       CDS       T08143                                 
Name
(GenBank) response regulator transcription factor
  KO
K07691  two-component system, NarL family, competent response regulator ComA
Organism
csua  Litchfieldia suaedae
Pathway
csua02020  Two-component system
csua02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:csua00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    IM538_22065
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    IM538_22065
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:csua02022]
    IM538_22065
Two-component system [BR:csua02022]
 NarL family
  ComP-ComA (competence)
   IM538_22065
SSDB
Motif
Pfam: Response_reg GerE DUF7646 HTH_24 Sigma70_r4_2 Sigma70_ECF
Other DBs
NCBI-ProteinID: QOR66414
LinkDB
Position
complement(4220563..4221210)
AA seq 215 aa
MINVLIVDDHPAIGEGTKLILEQEADFKVDFIDPCLIPTIDFKNYQVFILDLYMPEINGL
VLTKNIVASHPEAIILIYTGFEISTHFTLMIEAGVHGFISKTATKEQLITSIRCALRDEV
VIPLQLLKQLKKVESKPVGNELDDISLNMREQQILVEVAKGSTNREIAENLILSQRTVEY
CLTGIFNKFGVKSRTEALNKANKYGLIPSRLIETE
NT seq 648 nt   +upstreamnt  +downstreamnt
atgatcaatgtactaattgttgatgaccatcctgctatcggtgaaggaaccaagctgatt
ttagagcaggaagctgattttaaggtagacttcatagacccttgtctcattccaacgatt
gattttaaaaactaccaggtgtttattttagatttgtatatgcctgaaattaatggactt
gttttaacgaaaaatatcgttgcgtctcatccagaagcaatcattcttatttatactggt
tttgaaataagcactcattttacattaatgattgaagcgggagtgcatggctttattagt
aagactgcaacaaaggagcagctaatcacatcgattcgttgtgcacttcgagacgaagtg
gtcatcccactgcaacttttaaaacagttgaaaaaggtagagtccaagccggttggaaat
gagttagatgatatttccctgaacatgagagaacaacaaatccttgtcgaggttgcaaag
ggaagtaccaatcgagaaatcgctgaaaatttaattttaagtcaacgaacagtcgaatat
tgcctaaccgggatatttaacaaatttggggttaaatcacggactgaggcattaaataag
gcgaataagtatgggttgattccaagtcggttgattgaaacagaatga

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