Litchfieldia suaedae: IM538_22615
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Entry
IM538_22615 CDS
T08143
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
csua
Litchfieldia suaedae
Pathway
csua00260
Glycine, serine and threonine metabolism
csua00460
Cyanoamino acid metabolism
csua00630
Glyoxylate and dicarboxylate metabolism
csua00670
One carbon pool by folate
csua00680
Methane metabolism
csua01100
Metabolic pathways
csua01110
Biosynthesis of secondary metabolites
csua01120
Microbial metabolism in diverse environments
csua01200
Carbon metabolism
csua01230
Biosynthesis of amino acids
csua01240
Biosynthesis of cofactors
csua04981
Folate transport and metabolism
Module
csua_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
IM538_22615
09102 Energy metabolism
00680 Methane metabolism
IM538_22615
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
IM538_22615
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
IM538_22615
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
IM538_22615
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
IM538_22615
Enzymes [BR:
csua01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
IM538_22615
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
DegT_DnrJ_EryC1
OKR_DC_1
SelA
Motif
Other DBs
NCBI-ProteinID:
QOR69041
LinkDB
All DBs
Position
complement(4332222..4333463)
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AA seq
413 aa
AA seq
DB search
MKHLSQQDKSVFAAIQDELGRQRTKIELIASENFVSEAVMEAQGSVLTNKYAEGYPGRRY
YGGCEHVDVVENIARDRAKEIFGAEHVNVQPHSGAQANMAVYFTILNQGDTVLGMNLSHG
GHLTHGSPVNFSGIQYNFVEYGVDPDTHRINYEDVLEKARLHKPKLIVAGASAYPRAIDF
KRFREIADEVGAYLMVDMAHIAGLVAAGLHQNPVPFADFVTTTTHKTLRGPRGGMILCKE
EYAKKIDKSIFPGIQGGPLMHVIASKAVAFGEALLPEFKDYAQAVIDNAHHLAEALKKEG
LNIVSDGTDNHLLLIDVRSLGITGKVAEHVLDEIGITTNKNTIPFDPESPFVTSGLRIGT
AAVTSRGFGLDEMTEIASIIAFTLKNHEDEAKLAEAKQRVETLTAKFTLYKEL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatttatcgcagcaagataaaagcgtttttgcagccattcaagatgaattaggt
agacaacgtaccaaaattgagcttatcgcatcagaaaactttgtaagtgaagccgttatg
gaagctcaagggtcagttcttacaaataagtatgcagaaggatatcctggacgtcgttat
tatggcggctgtgagcatgttgatgttgtagaaaatattgcgagagaccgagcgaaagaa
attttcggtgcagagcatgtaaacgttcaaccacactctggtgctcaagcgaacatggct
gtttatttcacgatattaaatcagggtgatacagtactcggaatgaatctatctcacggt
ggacatttaacgcacggtagcccagttaactttagtggaattcaatataatttcgtagaa
tacggagttgatcctgatacacaccgtattaattatgaagatgttctggaaaaagcaaga
ttacataaaccaaaattaatcgtagcgggagcaagtgcatatccacgcgcaattgatttc
aaacgttttagagaaatcgcagatgaggttggcgcatatctaatggtagacatggcgcac
attgcaggtttagttgcagccggtcttcatcaaaaccctgttccatttgctgatttcgtt
acgactacaacacataaaacactacgtggtccacgtggtgggatgattctttgtaaggaa
gaatatgcaaagaaaattgataaatcaatcttccctggaattcaaggtggtccattaatg
cacgtgattgcttcaaaagcagtagcctttggagaagcacttctacctgaatttaaagac
tatgctcaagcagtcattgacaatgcacaccatttagctgaagccttgaaaaaagaaggc
ttgaacatcgtatcagatggaacggataatcacttactattaattgatgttcgttcatta
ggcatcactggtaaggtagccgagcatgttctagatgaaatcgggatcacgacaaataaa
aacacaatcccatttgatcctgaaagcccattcgtaacaagtggtctacgaattggaaca
gcagcagtaacaagccgtggcttcggactagacgaaatgacggaaattgcttcaatcatt
gcatttacacttaaaaaccacgaagacgaagcaaaacttgctgaagcaaaacaacgtgtt
gaaacactaactgcgaaattcacattatataaagaactataa
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