Litchfieldia suaedae: IM538_22955
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Entry
IM538_22955 CDS
T08143
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
csua
Litchfieldia suaedae
Brite
KEGG Orthology (KO) [BR:
csua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csua03032
]
IM538_22955
03036 Chromosome and associated proteins [BR:
csua03036
]
IM538_22955
03400 DNA repair and recombination proteins [BR:
csua03400
]
IM538_22955
DNA replication proteins [BR:
csua03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
IM538_22955
Chromosome and associated proteins [BR:
csua03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
IM538_22955
DNA repair and recombination proteins [BR:
csua03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
IM538_22955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
Rpf1_C
Motif
Other DBs
NCBI-ProteinID:
QOR66580
LinkDB
All DBs
Position
complement(4402427..4402699)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELVNAVAEASELSKKDATKAVDAVFDAIQDALKGGDKVQLIGFGNFEVRERAARKG
RNPQTGEEIEIAASKVPAFKPGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaacagaattagtaaatgcagttgctgaagctagtgaactttcaaaaaaggat
gctactaaagctgtagacgcagttttcgatgcaatccaagatgcgcttaaaggcggagat
aaagtacaactaatcggttttggaaactttgaagttcgtgagcgtgcagctcgtaaaggc
cgcaacccacaaactggtgaagaaatcgaaatcgctgcaagcaaagtacctgcgttcaaa
ccaggtaaagctcttaaagacgcagtaaactaa
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integrated database retrieval system
